| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3568 |
|---|
| Symbol | |
|---|
| ID | 6311594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3805400 |
|---|
| End bp | 3806152 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642652290 |
|---|
| Product | urea ABC transporter, ATP-binding protein UrtE |
|---|
| Protein accession | YP_001926252 |
|---|
| Protein GI | 188582807 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.895169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCAGA CCGCCACCGC CTCCTCTTCC GTCGTGCCGC CGGTCGTGAC CGGCGCGCAG
CCGATGCTGG CGATCTCCGA TCTCCACGCC GCCTACGGCC AGAGCGAGGT TCTGCACGGC
ATCGACATCA CCGTGGCGCC CGGCGAGATC GTCGCCGTGA TGGGCCGCAA CGGCATGGGC
AAGTCGACGC TCATGAAGAC GCTGATGGGC ATCGTCCCGA CGAAGTCGGG CACCATCACC
GTGGACGGCA CCGACGTCAC CACCCTGAAG AGCCATGCCC GCGTGGCGAA GGGGCTGGCC
TACGTGCCGC AGGGCCGGAT GATCTTCTCC ACCATGACGG TGCAGGAGAA CATCGAGACG
GGCCTGACCG TCACCGGCTC GCGGAAGGTG CCGCAGGACC TCTACACGAT GTTCCCGGTG
CTGCTGGAGA TGAAGGGCCG GCGCGGCGGC AACCTATCGG GCGGCCAGCA GCAGCAGCTC
GCCATCGCAC GGGCGCTCGC CAGCAATCCA AAAGTTCTTC TTCTCGATGA GCCGACGGAG
GGTATTCAAC CCTCGATTAT TCGCGAAATG GGGCGTACGC TGAAGAAGAT TCGCGACGAG
CGCGGTCTGT CGATCGTCGT CTCGGAGCAG GTGCTCAGCT TTGCCATGGA CGTGGCCGAC
CGGGTTCTCG TGATCGAGAA CGGCTCGATC GTCCACGAGA GTCTCCGTGC CGACATCGAC
GAGGCGCAGG TCGCCCGCTT CCTCTCGGTC TGA
|
|---|
| Protein sequence | MLQTATASSS VVPPVVTGAQ PMLAISDLHA AYGQSEVLHG IDITVAPGEI VAVMGRNGMG
KSTLMKTLMG IVPTKSGTIT VDGTDVTTLK SHARVAKGLA YVPQGRMIFS TMTVQENIET
GLTVTGSRKV PQDLYTMFPV LLEMKGRRGG NLSGGQQQQL AIARALASNP KVLLLDEPTE
GIQPSIIREM GRTLKKIRDE RGLSIVVSEQ VLSFAMDVAD RVLVIENGSI VHESLRADID
EAQVARFLSV
|
|---|
| |