| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3564 |
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| Symbol | |
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| ID | 6311580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 3801029 |
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| End bp | 3802489 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642652286 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_001926248 |
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| Protein GI | 188582803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | [TIGR01168] Gram-positive signal peptide, YSIRK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAGC GAATGACACA GACAAGGCCG AGCCGCCGCC GCGGCGTCAG GATCGGCACG
GCGAGCGCCC TGCTGGCGGC AGGTCTCGCT ACGGCGACGG GCGCTTCGGC GCAGCAGCCC
TCGCCGGTGG GGCAGTTCAA CGATCAGACG CAGCCGCGCA CCGATCCCAA CATCGCCGCC
AAACCCGCCG ATCCCGTCCG CACCGGACCG CTCGCCCCCT GGGCCACCGA CATGGCCGCG
CGCGGGCTCA CCTTCGACAT CAACATCTAC AACTTCTACC AGGCCAACCC CTCGGCCGGA
CTGCGCACCG GCGAGCAGTC CAACTCCACC TACTTCGTCC TCTCCATGAC CGCCGACATG
CAGCGGCTCG CCGGCATCGC CGGCGGCACC ATCAAGTTCA CTCAGACCTT CTTCGGCAAC
GTCCGCAACC TCAACATGGC CGCCGATATC GGCGACACCA CGGTCGGCTA CCAGCCGCCC
TACAACCCCA ACTCCAACCG CCTCTCGCTG CTCACCTACC AGCAGAAGCT CCTCGACGAC
CGCCTCGTCA TCGAGGTCGG CCGCACCCAT CCCGACCGCT ACTACGGCCT GCCGCCGTGC
AACTCGATCA ACTCCTGCTT CCAGGACCTG TTCTACATCA ACGCCGGCTT CACCTCGCCG
CTCTACGCCG TCTGGGGCGC CAACGCCGCC TACCAGCTCT CGCCCACCAC CTACGTCCAG
GCCGGCGCCT TCTCGGTGAA CCCCGGCACC AACGCGCTCT CGGGCTATGA CTGGGGCTAC
GAGCGCCTCT CGGGCGCGCT CGTCATGACC GAGGTCGGCT ACAAGACCGA CTACACCATG
ACCGCCTATC CCGGCCGCGC CTCGCTGACC GGCTTCTTCA ACACGGCCGA TCACGACGAC
AACTTCAAGA CGGTGTTCGG CACCTCCAAG GGCCTCAACC CCGGCGCTCC GGTGCTGCAG
AAGTCGGGCA CGTCCGGCAT CGTGCTGACC GGCACCCAGA CGGTCTGGCG CGCCGATGGC
GGGCTGGTGG CCAACCCGCA CCCGACCGCG GTCTCGCTCT ACACCGGCAC GGGCTACTCG
TTCGACCCGA CGGTGCCGAT CCGCTTCAAC TCGTTCGTGG GCGTGCGCCT CGACGCGCCC
GACCAGAGCC GGCCCAACGA CAGCTACGGC CTGAAAATGA ACTGGCAGCG CCTGTCGGAG
AACTACACGC AGTTCCTGGC GGACGCGAAC TTCATCTCGG GCGGTTCGGG CGCGCCGTAT
TCGCGCGACA AGTTCGTGTT CGAGGCCAAC GCGCATTTCG ACGTCGGCGC GGGCGTGATC
ATCGAGCCGG TGGTGCAGTA CGTGGTCAAC CCGAACTCGT TCTGGAACCC CTTCACCGCG
CGCCGGGCCA AGGACGGCTT CTATGCCGGC GCCACCCTCG TCGTCCCGCT CGGAACCCTG
CTCGGCCTCG CGCCGGGCTA A
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| Protein sequence | MLERMTQTRP SRRRGVRIGT ASALLAAGLA TATGASAQQP SPVGQFNDQT QPRTDPNIAA
KPADPVRTGP LAPWATDMAA RGLTFDINIY NFYQANPSAG LRTGEQSNST YFVLSMTADM
QRLAGIAGGT IKFTQTFFGN VRNLNMAADI GDTTVGYQPP YNPNSNRLSL LTYQQKLLDD
RLVIEVGRTH PDRYYGLPPC NSINSCFQDL FYINAGFTSP LYAVWGANAA YQLSPTTYVQ
AGAFSVNPGT NALSGYDWGY ERLSGALVMT EVGYKTDYTM TAYPGRASLT GFFNTADHDD
NFKTVFGTSK GLNPGAPVLQ KSGTSGIVLT GTQTVWRADG GLVANPHPTA VSLYTGTGYS
FDPTVPIRFN SFVGVRLDAP DQSRPNDSYG LKMNWQRLSE NYTQFLADAN FISGGSGAPY
SRDKFVFEAN AHFDVGAGVI IEPVVQYVVN PNSFWNPFTA RRAKDGFYAG ATLVVPLGTL
LGLAPG
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