| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3563 |
|---|
| Symbol | amiE |
|---|
| ID | 6311579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3799880 |
|---|
| End bp | 3800992 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642652285 |
|---|
| Product | acylamide amidohydrolase |
|---|
| Protein accession | YP_001926247 |
|---|
| Protein GI | 188582802 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.410168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGCG CGCACACCGG TGCGGCCTTT CCCCCAATCC AACCGGAGGA AAACGCCGCC
ATGATGCACG GCGATATCTC ATCGAGCCAG GACAGCGTCG GCGTCGCCGT CGTGAACTAC
AAGATGCCCC GGCTGCACAC CAAGGCCGAG GTCTTGGAGA ACGCCAAGAA GATCGGCGAC
ATGATCATCG GGATGAAGGC CGGCCTGCCG GGCCTCGATC TCGTGATCTT CCCCGAATAC
TCGACCCACG GGATCATGTA CGACGCGGCG GAGATGTACG AGACCGCCTC TTCCATCCCC
GGCGCGGAAA CCGAGATCTT TGCCGATGCC TGCCGCAAGG CGGGGGTCTG GGGCGTGTTC
TCGCTCACCG GTGAGCGCCA CGAGGAGCAT CCGCGCAAAG CCCCCTACAA CACGCTCATC
CTGATGAACG ACCAGGGCGA GATCGTGCAG AAGTATCGCA AGATCATGCC CTGGACCCCG
ATCGAGGGCT GGTATCCGGG CGATCGCACC TACGTCTCGG ACGGTCCGAA GGGCCTCAAG
ATCAGCCTGA TCATCTGCGA TGACGGCAAC TATCCCGAGA TCTGGCGCGA CTGCGCCATG
CGCGGCGCCG AACTCATCAT CCGCTGCCAG GGCTACATGT ATCCGGCCAA GGAACAGCAG
GTTCTGATCT CGAAGGCGAT GGCGTTTGCC AACAACACCT ACGTCGCGGT CGCCAACGCC
GCCGGATTCG ACGGGGTCTA TTCCTACTTC GGCCACTCGG CGATCATCGG CTTCGACGGC
CGCACGCTCG GCGAGTGCGG CGAGGAGGAG ATGGGTATCC AGTACGCGGC GCTGTCGAAG
TTCCTGATCC GCGACTTCCG CGCCCACGGC CAGTCGGAGA ACCACCTCTT CAAGCTGCTG
CACCGCGGCT ACACGGGCAT GATCAACTCG AAGGAGAACC GGCACGGGAT GTCGGAATGC
CCCTACGACT TCTACCGCCG CTGGATCGAG GACCCCGACG GCACCCGCGA CGCGGTGCGT
GCCATCACCC GCTCCAGCGT CGGCACCGAG GAATGCCCGA TCGAGGGCAT CCCCTTCGTC
GGAAAGGGCG AGGGTCCGCC CGACCCGCGC TGA
|
|---|
| Protein sequence | MGRAHTGAAF PPIQPEENAA MMHGDISSSQ DSVGVAVVNY KMPRLHTKAE VLENAKKIGD
MIIGMKAGLP GLDLVIFPEY STHGIMYDAA EMYETASSIP GAETEIFADA CRKAGVWGVF
SLTGERHEEH PRKAPYNTLI LMNDQGEIVQ KYRKIMPWTP IEGWYPGDRT YVSDGPKGLK
ISLIICDDGN YPEIWRDCAM RGAELIIRCQ GYMYPAKEQQ VLISKAMAFA NNTYVAVANA
AGFDGVYSYF GHSAIIGFDG RTLGECGEEE MGIQYAALSK FLIRDFRAHG QSENHLFKLL
HRGYTGMINS KENRHGMSEC PYDFYRRWIE DPDGTRDAVR AITRSSVGTE ECPIEGIPFV
GKGEGPPDPR
|
|---|
| |