Gene Mpop_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3558 
Symbol 
ID6311574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3793899 
End bp3795146 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content68% 
IMG OID642652280 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_001926242 
Protein GI188582797 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.987899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAC AGGGACCGGG ATACGGCGCC GTCTCGCGCC GGACGCTCGT GCGGGGCATG 
GCCGCCGCCG GCACGCTCGC GGGCATCGGC ATGCCCTTCG TCGCCCGCGC GGCGGAGCCG
ATCCGCATCG GCTTCCCGAC GCCGGTCACC GGGCCGTTCG GCGCCGAGGC CAAGGACCAG
ATCCGCTCCG CCGAACTCGC GGTCAAGCAG TTCAACGAGG CCGGCGGCCT GAACGGCCGG
ATGGCCGAAT TGCTGGTGCG CGACGACAAG CTCAATCCCG GCGAGGCCGC GACCCGGACG
CTGGAGCTGA TCGAGAAGGA TCGGGCCCAC TTCATCGTCG GTGCCCTGTC GAGCGCGGTG
CAGCTCTCGG TCAACGAGAT CACCCGCTCG CGAAAGGTCA TCTACGTCTC GATCAGCCAG
TCGGACACGA TCAACGAGGC CAAGGATTTC AGCCGCCACA CCTTCCACGA GGCCCTGAAC
CCGCACATGA CCACCGCCGC GGTGGCCAAG CACGCCTTCA AGAAGGGCAC ACGGGTCGCC
TACCTCGTCG CCGACTACGC CTACGGCCAC GAGATGCTGC GCGGCTTCAA GCGCGCGGCG
GCCGCCATCG GCGCCGAGAC CGCGGGCGAG ATCCTGCACC CGTTCGGGGC GCCCGACTAC
TCGACCTTCA TGCCCCGCCT GCGGGCGATG CGCCCCGATA TCCTCTGCAT CTGCAATTTC
GGCCGCGACC AAGCCAACAG CATCAAGCAG GCCAACGATT TCGGGCTGAA GAAGGCGTCC
CGGATCGTCG TGCCCGTGCT CCTGCACAAC CAGCGCCTCG CGGGCGGGGC CGACGCCTTC
GAGGGCGTGG TGGGCGCGAG CAACTACTAC TGGCGCCTCG AAGAGACGGT GCCGACGGCC
AAGGCCTTCA ACGACGCGTT CCGCGCCGCT TATGCGGGGG CGGTGCCCAC CGATTATGGC
GCCTACGGCT ACACCGCCGT GCGCTCCCTG CTGATGGCGG TGAAGGCGGC GGGCGATACC
GACACGGACA AGGTCGTCAC GGCCCTGGAG GGCCTGAAAT ACGACGTCGC CAAGGGCCCC
GAGAGCTACC GCGCCTGCGA TCACCAAGCG ATCCAGTCGG TGCTCATCAC CGAGTCCAAG
AAGAAGTCCG AGATGCAGGG CGAGGCCGAC CTGTTCAGGA TCCTCGAGGT CGAGCCGGGT
TCGGAGGCGA TGCTGCGCTC CTGCGACGAA CTCGGCCACC GCGCCTGA
 
Protein sequence
MNRQGPGYGA VSRRTLVRGM AAAGTLAGIG MPFVARAAEP IRIGFPTPVT GPFGAEAKDQ 
IRSAELAVKQ FNEAGGLNGR MAELLVRDDK LNPGEAATRT LELIEKDRAH FIVGALSSAV
QLSVNEITRS RKVIYVSISQ SDTINEAKDF SRHTFHEALN PHMTTAAVAK HAFKKGTRVA
YLVADYAYGH EMLRGFKRAA AAIGAETAGE ILHPFGAPDY STFMPRLRAM RPDILCICNF
GRDQANSIKQ ANDFGLKKAS RIVVPVLLHN QRLAGGADAF EGVVGASNYY WRLEETVPTA
KAFNDAFRAA YAGAVPTDYG AYGYTAVRSL LMAVKAAGDT DTDKVVTALE GLKYDVAKGP
ESYRACDHQA IQSVLITESK KKSEMQGEAD LFRILEVEPG SEAMLRSCDE LGHRA