Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3558 |
Symbol | |
ID | 6311574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 3793899 |
End bp | 3795146 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642652280 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_001926242 |
Protein GI | 188582797 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.987899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAC AGGGACCGGG ATACGGCGCC GTCTCGCGCC GGACGCTCGT GCGGGGCATG GCCGCCGCCG GCACGCTCGC GGGCATCGGC ATGCCCTTCG TCGCCCGCGC GGCGGAGCCG ATCCGCATCG GCTTCCCGAC GCCGGTCACC GGGCCGTTCG GCGCCGAGGC CAAGGACCAG ATCCGCTCCG CCGAACTCGC GGTCAAGCAG TTCAACGAGG CCGGCGGCCT GAACGGCCGG ATGGCCGAAT TGCTGGTGCG CGACGACAAG CTCAATCCCG GCGAGGCCGC GACCCGGACG CTGGAGCTGA TCGAGAAGGA TCGGGCCCAC TTCATCGTCG GTGCCCTGTC GAGCGCGGTG CAGCTCTCGG TCAACGAGAT CACCCGCTCG CGAAAGGTCA TCTACGTCTC GATCAGCCAG TCGGACACGA TCAACGAGGC CAAGGATTTC AGCCGCCACA CCTTCCACGA GGCCCTGAAC CCGCACATGA CCACCGCCGC GGTGGCCAAG CACGCCTTCA AGAAGGGCAC ACGGGTCGCC TACCTCGTCG CCGACTACGC CTACGGCCAC GAGATGCTGC GCGGCTTCAA GCGCGCGGCG GCCGCCATCG GCGCCGAGAC CGCGGGCGAG ATCCTGCACC CGTTCGGGGC GCCCGACTAC TCGACCTTCA TGCCCCGCCT GCGGGCGATG CGCCCCGATA TCCTCTGCAT CTGCAATTTC GGCCGCGACC AAGCCAACAG CATCAAGCAG GCCAACGATT TCGGGCTGAA GAAGGCGTCC CGGATCGTCG TGCCCGTGCT CCTGCACAAC CAGCGCCTCG CGGGCGGGGC CGACGCCTTC GAGGGCGTGG TGGGCGCGAG CAACTACTAC TGGCGCCTCG AAGAGACGGT GCCGACGGCC AAGGCCTTCA ACGACGCGTT CCGCGCCGCT TATGCGGGGG CGGTGCCCAC CGATTATGGC GCCTACGGCT ACACCGCCGT GCGCTCCCTG CTGATGGCGG TGAAGGCGGC GGGCGATACC GACACGGACA AGGTCGTCAC GGCCCTGGAG GGCCTGAAAT ACGACGTCGC CAAGGGCCCC GAGAGCTACC GCGCCTGCGA TCACCAAGCG ATCCAGTCGG TGCTCATCAC CGAGTCCAAG AAGAAGTCCG AGATGCAGGG CGAGGCCGAC CTGTTCAGGA TCCTCGAGGT CGAGCCGGGT TCGGAGGCGA TGCTGCGCTC CTGCGACGAA CTCGGCCACC GCGCCTGA
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Protein sequence | MNRQGPGYGA VSRRTLVRGM AAAGTLAGIG MPFVARAAEP IRIGFPTPVT GPFGAEAKDQ IRSAELAVKQ FNEAGGLNGR MAELLVRDDK LNPGEAATRT LELIEKDRAH FIVGALSSAV QLSVNEITRS RKVIYVSISQ SDTINEAKDF SRHTFHEALN PHMTTAAVAK HAFKKGTRVA YLVADYAYGH EMLRGFKRAA AAIGAETAGE ILHPFGAPDY STFMPRLRAM RPDILCICNF GRDQANSIKQ ANDFGLKKAS RIVVPVLLHN QRLAGGADAF EGVVGASNYY WRLEETVPTA KAFNDAFRAA YAGAVPTDYG AYGYTAVRSL LMAVKAAGDT DTDKVVTALE GLKYDVAKGP ESYRACDHQA IQSVLITESK KKSEMQGEAD LFRILEVEPG SEAMLRSCDE LGHRA
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