| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3555 |
|---|
| Symbol | |
|---|
| ID | 6311571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3791178 |
|---|
| End bp | 3791948 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642652277 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001926239 |
|---|
| Protein GI | 188582794 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0799958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGA TCACGAATCC CATTCTCGAG GTCGAGAATC TCGGCCGCCG CTTCGGCGCC
TTCACCGCGC TCGAAGGCGT CAGCGCCGCC TTCGGCGAAG GGCGCATCAC CGCGATCATC
GGTCCGAACG GAGCGGGGAA GAGCACCTTC TTCAACCTGC TCTCCGGCGC TCTGAAGCCG
ACGAGCGGGC GCTTACGCTT CTCGGGTCGC GACATGACGC GGGTGCCCCA GGCGCGCTTT
GCCCATCTCG GCATCGCCCG CTCTTACCAG ATCACCAACG TCTTCCCGCG GCTGACCGCC
CATGAGAACG TGCGCACCGC CCTCCAGGCG CGGGTCAGCC GCTACGATTT CTGGTCCCGA
CGCGACGCGC GCACCGATCT CGCCGTCCGC GCCGACGACA TCCTCGAATC CGTCGGCCTC
GCCGGGCGCC GCGACCGGCC CGCCGCCGCC CTCGCCCATG GCGAGCAGCG GGCGCTGGAG
ATCGGCATCG CGCTCGCCGC CGATCCGCGC CTGCTGCTCC TCGACGAGCC CACCGCCGGG
ATGGGGCCGG AGGAGACCAA GGAGATGGTG GCGCTGCTGC GCCGCCTGGG CGAGAGCCGC
ACCATCCTGC TCGTCGAGCA CAAGATGAAG ATGATCCTCG GCCTGTCGGA GCGGATCCTC
GTGCTGCATC ACGGCCGGCT CATCGCCGAC GGGACGCCGG CCGAGATCCA GGCCGACCGG
GAGGTGCGCC GGGTCTATCT CGGCCAGAGC GGCGGGTACG GCCATGCTTG A
|
|---|
| Protein sequence | MNPITNPILE VENLGRRFGA FTALEGVSAA FGEGRITAII GPNGAGKSTF FNLLSGALKP
TSGRLRFSGR DMTRVPQARF AHLGIARSYQ ITNVFPRLTA HENVRTALQA RVSRYDFWSR
RDARTDLAVR ADDILESVGL AGRRDRPAAA LAHGEQRALE IGIALAADPR LLLLDEPTAG
MGPEETKEMV ALLRRLGESR TILLVEHKMK MILGLSERIL VLHHGRLIAD GTPAEIQADR
EVRRVYLGQS GGYGHA
|
|---|
| |