Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3554 |
Symbol | |
ID | 6311541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 3790481 |
End bp | 3791185 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642652276 |
Product | ABC transporter related |
Protein accession | YP_001926238 |
Protein GI | 188582793 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.256863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGAGA TCGATCGCCT CGACGCGTGG TACGGCCCGA GCCACGTGCT GCACGGCCTC TCCCTCGACG TGCGCCAGGG CGAGATCCTG GCGCTGGTCG GCCGCAACGG CGCGGGCAAG ACCACCACCA TGAAGGCCGT GATGGGCCTG ATCCCGAAGG TGGCCGGCTC CGTCCGCTTC CTCGGCCAGG ATCTGCTCGG CCGCCCGGCC CATGCCCGCT TCCCGCTCGG GCTCGCCTAC GTGCCCGAGG ACCGGCGCAT CGTTCCGGGC CTGAGCGTGC GCGAGAACCT GAAGCTCGGC CTGCTCCGGG CCTCCGCCGC GATCAAGGAG GGGCCGGCCA TCGCCGAGAT CGCCGAGACC TTCCCGCGCC TCGCCGAGCG GCTCGACCAG ACGGCCGTGA CGATGTCCGG CGGCGAGCAG CAGATGCTGG CCATCGCCCG CGCCATGATC GCGCGCCCCA AGCTTATCCT GCTCGACGAG CCCTCGGAGG GCATCATGCC GGTGCTGGTC GAGGAGATGG GCCGGCTGTT CCTCGCCCTG CGCGAGCGCG GCGTCACGCT GCTCCTCGTC GAGCAGAACG TCGAGTGGGC GCTCAACCTC GCAGACCGCG CCGTCATCAT CGATCAGGGC GCCGTGGTGC ACGAAAGCTC GGCCGCGGCT CTGCGCGCCG ATACCGAAAT TCAGGACCGC TACTGCGCGG TCTGA
|
Protein sequence | MLEIDRLDAW YGPSHVLHGL SLDVRQGEIL ALVGRNGAGK TTTMKAVMGL IPKVAGSVRF LGQDLLGRPA HARFPLGLAY VPEDRRIVPG LSVRENLKLG LLRASAAIKE GPAIAEIAET FPRLAERLDQ TAVTMSGGEQ QMLAIARAMI ARPKLILLDE PSEGIMPVLV EEMGRLFLAL RERGVTLLLV EQNVEWALNL ADRAVIIDQG AVVHESSAAA LRADTEIQDR YCAV
|
| |