Gene Mpop_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3554 
Symbol 
ID6311541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3790481 
End bp3791185 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content71% 
IMG OID642652276 
ProductABC transporter related 
Protein accessionYP_001926238 
Protein GI188582793 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.256863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGA TCGATCGCCT CGACGCGTGG TACGGCCCGA GCCACGTGCT GCACGGCCTC 
TCCCTCGACG TGCGCCAGGG CGAGATCCTG GCGCTGGTCG GCCGCAACGG CGCGGGCAAG
ACCACCACCA TGAAGGCCGT GATGGGCCTG ATCCCGAAGG TGGCCGGCTC CGTCCGCTTC
CTCGGCCAGG ATCTGCTCGG CCGCCCGGCC CATGCCCGCT TCCCGCTCGG GCTCGCCTAC
GTGCCCGAGG ACCGGCGCAT CGTTCCGGGC CTGAGCGTGC GCGAGAACCT GAAGCTCGGC
CTGCTCCGGG CCTCCGCCGC GATCAAGGAG GGGCCGGCCA TCGCCGAGAT CGCCGAGACC
TTCCCGCGCC TCGCCGAGCG GCTCGACCAG ACGGCCGTGA CGATGTCCGG CGGCGAGCAG
CAGATGCTGG CCATCGCCCG CGCCATGATC GCGCGCCCCA AGCTTATCCT GCTCGACGAG
CCCTCGGAGG GCATCATGCC GGTGCTGGTC GAGGAGATGG GCCGGCTGTT CCTCGCCCTG
CGCGAGCGCG GCGTCACGCT GCTCCTCGTC GAGCAGAACG TCGAGTGGGC GCTCAACCTC
GCAGACCGCG CCGTCATCAT CGATCAGGGC GCCGTGGTGC ACGAAAGCTC GGCCGCGGCT
CTGCGCGCCG ATACCGAAAT TCAGGACCGC TACTGCGCGG TCTGA
 
Protein sequence
MLEIDRLDAW YGPSHVLHGL SLDVRQGEIL ALVGRNGAGK TTTMKAVMGL IPKVAGSVRF 
LGQDLLGRPA HARFPLGLAY VPEDRRIVPG LSVRENLKLG LLRASAAIKE GPAIAEIAET
FPRLAERLDQ TAVTMSGGEQ QMLAIARAMI ARPKLILLDE PSEGIMPVLV EEMGRLFLAL
RERGVTLLLV EQNVEWALNL ADRAVIIDQG AVVHESSAAA LRADTEIQDR YCAV