Gene Mpop_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3533 
Symbol 
ID6311520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3765862 
End bp3766824 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content72% 
IMG OID642652255 
Productlipopolysaccharide biosynthesis protein 
Protein accessionYP_001926217 
Protein GI188582772 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCG CCCGCCTCCG CACGGCGCCA GCGCCGGCGC CCCGAACGAT CTGGAGCGGC 
GCGCGTCCCG CCCAGGAGGC TTCGGCGGGC ATCGCCGCGA GCCTGGGGCT CCTGCGCCGG
AAGCTGCCGT TCCTGGCGCT GTGGATCGCG GCCTTCGTCG CGGCCGGAGC GGTCTACGTG
AAGCTGCTGC GGCCGGATTT CGTCGCCACG ACGCAGGTCC TCCTGCAACC GCGCATCATC
ATCAACGACG GCCCCGAGGA TGTGCGGCAC TTCCACCAGT TCATGATCGA CGGCGAGCAG
TGCGAGACCG AATTGCGGGT CCTGCGCTCG GAGCAGCTGC TCTACCGCGT CTTCAAGGCG
CTGAACCTCG CCGAGGCGCC GGAGATCCGC AGCGGCCCGG ACGGGCTGTG GACCTATATC
GACGCCAAGG CCCGTCAGTT CGAGCGCCTC ATCGGGCCCG CCGACGACGG TGTCCCGGCC
TTCTACGCCT TCGCCAACCG GGTGCGCTCG CGCCGCCTCG GCCTGTCCTA CGTGATCGAG
ATCTCCTACC GCGCGCAGAG CGCCGGCCAA GCGGCCCGGG TCGTGAACGC CATCGCCGTG
GCCTACGCCG CGCACCGTCT GCGGGGCGTG CTCGCCCGCG CGCAGCGCAG GGGCGTCTAT
CTCGAGAGCC GCCTGACGAG CCTGCAGGCG CAGCTCCTGG CGGCCGATGC CGGCCTGCGC
CTCGGGATCG TGCCCGAGAC CGGCATGCCC GATGCCGACG TGCGCCTGCT CGGGCCCGCT
ACGCTGCCGC TGCGCAGTTC TTTCCCGAAG CCGGGACCGT TGCTCGCCAT GATGGCCGGA
CTCGGGGCGG TGAGCGGTCT GCTGATCGTG CTGTTGCCGC GGACGACACC ACGGCCCGCG
CGCCCGGCCG CGCGGATCGG ACACTCGATC GCACACTCGC CTGAACGCGT GAGGATCGCA
TGA
 
Protein sequence
MRIARLRTAP APAPRTIWSG ARPAQEASAG IAASLGLLRR KLPFLALWIA AFVAAGAVYV 
KLLRPDFVAT TQVLLQPRII INDGPEDVRH FHQFMIDGEQ CETELRVLRS EQLLYRVFKA
LNLAEAPEIR SGPDGLWTYI DAKARQFERL IGPADDGVPA FYAFANRVRS RRLGLSYVIE
ISYRAQSAGQ AARVVNAIAV AYAAHRLRGV LARAQRRGVY LESRLTSLQA QLLAADAGLR
LGIVPETGMP DADVRLLGPA TLPLRSSFPK PGPLLAMMAG LGAVSGLLIV LLPRTTPRPA
RPAARIGHSI AHSPERVRIA