| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3503 |
|---|
| Symbol | |
|---|
| ID | 6310144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3733247 |
|---|
| End bp | 3734683 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642652226 |
|---|
| Product | peptidase M48 Ste24p |
|---|
| Protein accession | YP_001926188 |
|---|
| Protein GI | 188582743 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4784] Putative Zn-dependent protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.239909 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGGCTCG GCGCGCTGGC CGCGCTCGCG GGTCTGCTCG CGGCCTGCGC CGCCGACCAG
ACCGGCAGCG TGCTCACGCC CGCGGTCATC AAGGTGCCGG AGCAGGCGCC CAAGACCACG
GGGCGCACCC GCTCCGACGA GGCGGACCAC GCCAAGCTCG TGGCCTCCTT CGGCGGCGAG
TACCGCGCCC CGGCCGCCCA CCGGCTGATC AGCGAGATCA CCGACCGGCT GGTGCGCGCC
AGCGACCGGC CGCAGGAGAG CTACGCGGTG ACGCTGCTCG ACTCGCCCGT CGTCAACGCC
TTCGCCCTGC CGAGCGGCCG TCTCTACGTC ACCCGCGGCC TGCTGGCGCT GGCGAGCGAC
AGTTCGGAGG TCGCGGCGGT GCTCGCCCAC GAGATCGCCC ACGTGACCCT GCGCCACGCC
ACCGCCCGCA GCGAGATGGC CCTGCGCTCG CAGCTCGTGA GCCGGGTCGT GGCCGACGTG
CTGAACGATC CGGTCACCGG GGCGCAGCTC GAGAGCCAGT CCAAGTTCAC CCTTGCCCGC
TTCTCCCGCG AGCAGGAACT GGAGGCGGAC ACCAACGGGG TGCGCGTGCT GGCGCAGGCC
GGCTACGATC CCTTCGGCGC CGGCCGCTTC CTCGACGCGC TCCAGCGCAC CATGGCGCTC
AAAACCGGCA ACGGCAGCGC GGCCGAGCCC GACATGCTGG CGACGCACCC GGCCACCGCC
GAGCGCATCG CGCTCGTCAC CCGCGCGGCC CGGCGCATCG GCGCCCCCGG CCTCGGCACC
GACGACCGCG CCCCCTACCT CGCGGCGATC GACGGGCTCG CCTACGGCGA CAATCCCGGC
GAAGGGCTCG TGCGCGGGCG CCGCTTCCTG CATCCGGGGC TCGGTATCGC CTTCGAGGTG
CCGGACGCCT TCGCCATCGA GAACACCCGC AATGCCGTGC TCGGCACCAC GCCCGAGGGC
AGCCGCCGCC TGCTGTTCGA TCAGGTCGAG GCCAGCGGCG ACCGCAGCCT GGAGGACGTG
CTGCGCGCCA CCTGGAACGA CGCCATCGAG GCCGGCTCCG TCGAGAACCG CATCATCGGC
GGGCGCTCGG CGGTCACCGC GCTCTCCCGC GGCAAGGATT GGACCTTCCG CCTCGCGGCG
GTCCGCATGG GCGAGACCAC CTATCGCATG ATCATGGCGG CCAAGGGGGC GACCGATCCC
GAGCCGGCCT TCCGCCGCTG GCTGGAGAGC CTGCGCCCGA TCGAGCCGGA GGAGGCCGCC
GCCCTCAAGC CGGCGCATCT GCGCATCGTC ACCGCCGCCC CGGGCGACAC CGTCGAAGGT
CTGGCCCGCC GCATGAGCGT GCCCGACCGC GCGGTCGATC GCTTCCTCGT GCTCAACGGC
CTGCAGCGCG GCGCGGCGGT GAGGCCCGGC CAGGGCTACA AGCTCGTGGT GGAGTGA
|
|---|
| Protein sequence | MRLGALAALA GLLAACAADQ TGSVLTPAVI KVPEQAPKTT GRTRSDEADH AKLVASFGGE
YRAPAAHRLI SEITDRLVRA SDRPQESYAV TLLDSPVVNA FALPSGRLYV TRGLLALASD
SSEVAAVLAH EIAHVTLRHA TARSEMALRS QLVSRVVADV LNDPVTGAQL ESQSKFTLAR
FSREQELEAD TNGVRVLAQA GYDPFGAGRF LDALQRTMAL KTGNGSAAEP DMLATHPATA
ERIALVTRAA RRIGAPGLGT DDRAPYLAAI DGLAYGDNPG EGLVRGRRFL HPGLGIAFEV
PDAFAIENTR NAVLGTTPEG SRRLLFDQVE ASGDRSLEDV LRATWNDAIE AGSVENRIIG
GRSAVTALSR GKDWTFRLAA VRMGETTYRM IMAAKGATDP EPAFRRWLES LRPIEPEEAA
ALKPAHLRIV TAAPGDTVEG LARRMSVPDR AVDRFLVLNG LQRGAAVRPG QGYKLVVE
|
|---|
| |