Gene Mpop_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3478 
Symbol 
ID6311141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3710470 
End bp3711534 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content71% 
IMG OID642652201 
Productputative signal transduction histidine kinase 
Protein accessionYP_001926163 
Protein GI188582718 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.293899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCCG GTGACGACTG GCAGTTGACG GAGCGGATTC GCGCCAGCGC CCGCTCCGGC 
AAGGGGGATC CCTTCGCGGC GGCCGTGCGG GCGACGCGGA TGGCGATGAT CATCACCGAC
CCGCGCCGGC TCGACAACCC GATCATCTAC GCCAACGACG CATTCCTGCG GCTCACCGGC
TACACCCGGC TCGAGGTGAC CGGCCGCAAT TGCCGCTTCC TGCAGGGGCC GGAGACCGAC
CTCGACACGG TGGCGCGGAT CCGGGCCGCG ATCCGGTCCG AGCAGGACGT GAGCGCCGAG
CTTGTGAACT ACCGCAAGGA CGGCTCGACC TTCCACAACG CGCTGTTCAT CAGCCCTGTC
CACGACGAGG ACGGCACGCT CCTGTTCTTC TTCGCCTCCC AGCTCGATGT GAGCGAGCGC
CACGCGCTGG CCGCCGAGCG CGACCGGACG CGGACCGCTC TCGACGCGAA CGCGCTGCTG
CTGGGCGAGA TCGGCCACCG CGCCGGCAAC GACCTCCAGA TGATCTCGGC GATGCTGACG
CTTCAGAGCA GCAACAGCCG CGATCCGGCG GTGCGCGCGG CGCTCGCCGA GGCGATCGGG
CGGGTCGAGG CCCTCGGCGC GCTCTACCGT CAGCCCGTCC CGGCGGATGA GAGCGAGGGG
CACGATCTCG CCGATCTCGT CCGTGAGATC GCCGTCACCC GGGTCGAGGC GTCGGGCCGG
GACGACATCG CCCTCGCATT CGATCTCGCA CCGTATCGCA TCCGGCCCAG GGCGGCGGGA
CCGCTCGCGC TGGTCGTCAA CGAGGCCGTC TCCAACGCCA TCCGCCACGC CTTCCCGTCG
CGGGCCGGAA CGCTCACCCT GCGCGTCGTC CGCGAGGGCG AGGATCTGAT CGTGACGGTG
GAGGATGACG GGGTCGGCTT GAGCACGACG GCCGACGGCA GCTTCGGGAC GACGCTGACC
GACGTCCTGA GCCGGCAGGT CGGCGGCACG AGCCGCGTCC GGCCGCGTGA TCCTGCGGGC
ACAGCTGTCG AATTCCGCTT CCCGGCCGAG CCCATCCGGG CCTGA
 
Protein sequence
MEPGDDWQLT ERIRASARSG KGDPFAAAVR ATRMAMIITD PRRLDNPIIY ANDAFLRLTG 
YTRLEVTGRN CRFLQGPETD LDTVARIRAA IRSEQDVSAE LVNYRKDGST FHNALFISPV
HDEDGTLLFF FASQLDVSER HALAAERDRT RTALDANALL LGEIGHRAGN DLQMISAMLT
LQSSNSRDPA VRAALAEAIG RVEALGALYR QPVPADESEG HDLADLVREI AVTRVEASGR
DDIALAFDLA PYRIRPRAAG PLALVVNEAV SNAIRHAFPS RAGTLTLRVV REGEDLIVTV
EDDGVGLSTT ADGSFGTTLT DVLSRQVGGT SRVRPRDPAG TAVEFRFPAE PIRA