| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3454 |
|---|
| Symbol | |
|---|
| ID | 6311268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3683471 |
|---|
| End bp | 3684328 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642652178 |
|---|
| Product | cytochrome c oxidase subunit III |
|---|
| Protein accession | YP_001926140 |
|---|
| Protein GI | 188582695 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0832287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGGG CGCACGCCAA GAACCACGAC TACCACATCA TCAACCCGAG CCCGTGGCCC
TTGCTCGGCG CGTTCTCCGG GTTCCTGATG GCCTTCGGCG CCGTCTTCTG GATGAAGGGT
CTCTCCGCCG GCGGCCTCGC CATCGGTCCC TACGTGTTCG GCGCCGGCAC CCTCGGCGTG
CTCTACACGA TGCTGTCCTG GTGGCGCGAC GTCACCCACG AGGCGAATTC CGGCGACCAC
ACCCGCGTCG TCCAGCTCCA TCACCGCTAC GGCATGATCA TGTTCATCGC CTCCGAGGTG
ATGTTCTTCG TGGCGTGGTT CTGGGCCTAT TTCGAGGCCG CCCTCTACAC CGCCGATCCG
ATCCAGCCCC AGCGCGTCGA GTTCACCGGC GGCATGTGGC CGCCGAAGGG CATCGAGGCG
TTCGATCCCT GGCACCTGCC GCTCCTGAAC ACGCTGATCC TGCTCACTTC GGGCACCACC
GTGACCTGGG CCCACCACGC CCTGCTGCAC GGGGATCGCA AGGGCCTGAA GATGGGCCTG
TGGCTCACCA TCATCCTCGG CGTGCTCTTC ACCGCCTGCC AGGCCTACGA GTATGCCCAC
GCCCATTTCG GCTTCTCGGG CTCGATCTAC TCGGCGACGT TCTTCATGGC GACGGGCTTC
CACGGCGCCC ACGTCATCAT CGGCACGATC TTCCTCGCCG TCTGCCTGCT GCGCGCCTAT
GCCGGCGACT TCACCCCCAA GCAGCATCTC GGCTTCGAGT TCGCCGCTTG GTACTGGCAC
TTCGTCGACG TGGTGTGGCT GTTCCTGTTC GCCGCCATCT ACGTGTGGGG TGCGGGCGCC
GGCGGCGGCG CTCACTGA
|
|---|
| Protein sequence | MAGAHAKNHD YHIINPSPWP LLGAFSGFLM AFGAVFWMKG LSAGGLAIGP YVFGAGTLGV
LYTMLSWWRD VTHEANSGDH TRVVQLHHRY GMIMFIASEV MFFVAWFWAY FEAALYTADP
IQPQRVEFTG GMWPPKGIEA FDPWHLPLLN TLILLTSGTT VTWAHHALLH GDRKGLKMGL
WLTIILGVLF TACQAYEYAH AHFGFSGSIY SATFFMATGF HGAHVIIGTI FLAVCLLRAY
AGDFTPKQHL GFEFAAWYWH FVDVVWLFLF AAIYVWGAGA GGGAH
|
|---|
| |