Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3442 |
Symbol | |
ID | 6311276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 3670751 |
End bp | 3674017 |
Gene Length | 3267 bp |
Protein Length | 1088 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 642652166 |
Product | Sel1 domain protein repeat-containing protein |
Protein accession | YP_001926128 |
Protein GI | 188582683 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGA CTGCCCCGAT CAGCCTCGAC AGCTTCGACC CGGAGGTGCT CGCGGCTGCC CGCGAGGTCG CCCGGCGGGC GGGGGTGCCG CTGGAGACCT GGATCGCCTC GGTGGCTGCG CCCACCCCGT CGAAGCCGGC ACCGCGCCGC CGACGCTCGG ACGCCGCGCC ACCATCCGCC AAGACAGCGA ACAAGCCGGC GGGCACGGAG CCGGTGCGGC AGGTCGGAGG ACGGGCGGCG GAACCGGCCT CCGCGTCCGA CCCCGGCGCG GCGGCCCCGC AGCACAAGCG CCGCGAATCC TCCGCCGCTC CGGCGACCGA GGCCTCCGCG ATGGCCTCGC TCGAAGCCTC GCTCGGCGCG ATGATGCGGC GGCTCGACGC CCTCGACCAC TCGATCAGCG CGGAACGCGA AGCGTCCAAG GCCGATGCCG CGCGGATGGC CGGCGACATC GAGCGCCGAA TGGGCGAACT GGCCGGACAA CTGAACACCC CGCGACCGCT GGGCCGGCGC GGGCGCCCGC TCGCCAGCGA GGTCCGCGAC GCCGTCGCCG AGGTGCGACG CCGCCAGCGC GAGCTGGAGG AGGGGATCGC CGAGTGGAAC GCCGACACCG CCGTTGACGC CGCCGACGCC GCCGCCGGGC GGCAGGACGA CGGACCGGTG CGGACGGAGA TGCAGGCCGA TACCGTCTCC GGCGCGATAC CGTCGGCGGC GATCGCCGAG CTGCAGCGCG AGACAAGCCG GCTGCGCGAC ACGCTCGGCG GCCTCGCCAC CGGCCGCGAC GTGGGCGAGC TGGAGCAGAC CATGCACGCC GTCGCCAGCG ACCTCCGGCG AGCACGCGAC CCGCGCGAAG TCGCCGCCAT CGCCGCACCC ATCGAGCTGA TGCGCGTCCA GGTGGAGCGG CTGGCCGAGG ACGTGGCCGA CAACGTCCAT GCCCGCGTCG CGGGCGAGGT GGAGCGCCTG GCCTTCAAGG TCGACGAGGT TCTTTCCGGC GCCCTGTCGG GTCCGGCCGA CCAGAGCGCC CTCGAGAGCG TCTTCCGCGA ACTCGACGAG ATCCGCCGCC TCGTGGCCGC CCTGGCGGGA CCGGAGCGGA TCCAGAGCCT TGCCCAGGGT GTGCAGGCGA TCAGTGCGCA GATCGCGCAG CTCCAGCGGG ACGAGGATGC GGGGCTCGCC GCCATCAAGC CGCTGCTGGA GGAGATCCGC GGCGAGCTGA AGGCGCCCGC CGCCGCCCAG GAGCTTCCCG GCGCGCTGCT CGGCCGGTTC GAGGCGCTGG CCGACCGGCT CGACCGGGCC GAGGCCGGCT CCGTCGGCGA CCTGATCGAG CGGCTCGAAG CGGTGGCCGA GAAGGTCGAT CGCGTCAGCG CGGGCGGCAG CGGCCTCGAT GCCCTGGAGC GCCACGTCCT CGCCCTCGCG AGCCGGCTCG ACGCCCCGCG CACCGCCGAT CCGGCCGTGG CGCGCCTCGA ACGCTCCATG GGCGACCTGC TCGCCCAGGT CGCGGCCCTG CGCGACGGCG CCGGTCTGGA CGCCGCCGTC GAGCGCGCCG TCCGCGAGGC CATGTCGGGC TCGGCTGGCC CGCTCGCGGC GGCCGGCGGC GAGGTTGAGC TGCTGCGGGC CGATCTCGCC GAGATCCGCG CCCACCAGAA GGGCTCGGAC CAGCGCCTCC AAACGACGAT GGAGGGCGTG CAATCGGTGC TGATGCGGCT GAGCGAGCAG CTCGATCGGA CCATGACCTC CGCCGCCGCG CTCACCGCGG GCGCTCCGCA GGAGCACGCC CCCGCCGCGC CGCCGCGGAG CGAGCGCATC GCCCAGGAGC GCCCGGCCGC CCCGAAGACG GCCGGCCAGC CGCTGGGCCG GCCGCACCAG ACCCCGAAGC CCGACGCCGC GGCCCCTTCG CAGGCGAGCC GCATGTCCGA GGAGCTGCTG GAGCCCGGCG CCGGCCGGCC CGCGGCCGGG CGCCCGGCCG CGCCGGAGGC GGGATCCTCC GCCGGCAGCG CCGACATCAA GACGAGCTTC ATCGCCGCCG CGCGGCGCGC AGCCCAGGCG GCCCAGGCCG AAACCGCCGC CGAGACCCCG CTGACGGCGC GCCTGCGCGA CAAGGTCGCC CCGGCCGCCC GCATGCCGGG CGCTGCCGGC GCGGAGGCGA CGCCGCTCTC GCGGCTCCGC GGCGCCCTCG ACGGCCGCCG CCGCACGCTG CTGCTCGGTC TCGCCGCCGT GGTGCTGGCG CTCGGCGCCT ACCAAGCCTT CCTCGCCGGC AAGAGCATGC CGGCCGGCGA AGCCGCCGCG CCGGAGAGCC CCACGGTGGC AAGCACCGCC CCCGCCGCCT CCGAGGCCGG CACGGCCCGC AGCGCGGAGA CCAAGACCGA GCCCGGTTCG GAGCCGGTGT CGGCCGCGCC TGCGGAGGCT TCGGCCGAGG TGCCGGCACG GGCCAATCCC CCGGCGGTTC CGGCCGATCC GGCGACGACG CAATCCATCG CCGACGCGAA ATCCCCGTTG GTCAAGCGCG GGCTGCCCCA GGTCACCGGC ATGGCCGCCC TGGGGTCGGA CCTCGCCCCC CTGCCGCCGG GCCTGGCCAA GCTCAAGCAG GATGCCCTCG ACGGCGACGG CGCCGCGGTC TGGGAGATCG CGTCCCGCGA GGCCGAGGGC CGCGGCGTGA CGCGCGACCT CGGCCTCGCC GCCAAGCTCT ACGAGAAGCT CGCGACGGCC GGCTACGGGC CGGCCCAGTT CAAGACCGGC AATGCCTACG AGAAGGGTTC CGGCGTGGTC CGGGACATCG AGAAGGCGAA GGTCTGGTAC GGCCGCGCGG CGGATCAGGG CAACATCCGC GCGATGCACA ACCTCGCGGT CCTGCACGCG GAGAATCCGG CGGCCAACGG CCGGCCGGAC TTCGCGAGCG CCGCGAACGC CTTCCGCCGG GCCGCGGAGC ACGGCGTGCG CGACAGCCAG TACAATCTGG CCGTTCTCTA CGCCCGCGGA CTCGGCGTCG AGCAGAACCT CGTCCAATCC TATCTCTGGT TCTCCGCCGC CGCGGCGCAG GGCGATCAGG AAGCCGGCCG CAAGCGCGAC GAGGTCGCCA CCAAGCTCTC GCCGAAGGAT CTCACCGAGG CCAAAACCCT CGCCTCCGGC TTCCGGGCGC GGGCCGCCGA TCCGGCCGCG AACGAGGCGC CGTCGCCGAA AGCCACCGCT GCGGCGCCGA TGTCCCTGAT GGGCGCGCCG TCTCCGGGCC TGCCGAACGC CCCGTCCCAC GCGGCGCAGA AGCGGGTCGG GGTGTAA
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Protein sequence | MKQTAPISLD SFDPEVLAAA REVARRAGVP LETWIASVAA PTPSKPAPRR RRSDAAPPSA KTANKPAGTE PVRQVGGRAA EPASASDPGA AAPQHKRRES SAAPATEASA MASLEASLGA MMRRLDALDH SISAEREASK ADAARMAGDI ERRMGELAGQ LNTPRPLGRR GRPLASEVRD AVAEVRRRQR ELEEGIAEWN ADTAVDAADA AAGRQDDGPV RTEMQADTVS GAIPSAAIAE LQRETSRLRD TLGGLATGRD VGELEQTMHA VASDLRRARD PREVAAIAAP IELMRVQVER LAEDVADNVH ARVAGEVERL AFKVDEVLSG ALSGPADQSA LESVFRELDE IRRLVAALAG PERIQSLAQG VQAISAQIAQ LQRDEDAGLA AIKPLLEEIR GELKAPAAAQ ELPGALLGRF EALADRLDRA EAGSVGDLIE RLEAVAEKVD RVSAGGSGLD ALERHVLALA SRLDAPRTAD PAVARLERSM GDLLAQVAAL RDGAGLDAAV ERAVREAMSG SAGPLAAAGG EVELLRADLA EIRAHQKGSD QRLQTTMEGV QSVLMRLSEQ LDRTMTSAAA LTAGAPQEHA PAAPPRSERI AQERPAAPKT AGQPLGRPHQ TPKPDAAAPS QASRMSEELL EPGAGRPAAG RPAAPEAGSS AGSADIKTSF IAAARRAAQA AQAETAAETP LTARLRDKVA PAARMPGAAG AEATPLSRLR GALDGRRRTL LLGLAAVVLA LGAYQAFLAG KSMPAGEAAA PESPTVASTA PAASEAGTAR SAETKTEPGS EPVSAAPAEA SAEVPARANP PAVPADPATT QSIADAKSPL VKRGLPQVTG MAALGSDLAP LPPGLAKLKQ DALDGDGAAV WEIASREAEG RGVTRDLGLA AKLYEKLATA GYGPAQFKTG NAYEKGSGVV RDIEKAKVWY GRAADQGNIR AMHNLAVLHA ENPAANGRPD FASAANAFRR AAEHGVRDSQ YNLAVLYARG LGVEQNLVQS YLWFSAAAAQ GDQEAGRKRD EVATKLSPKD LTEAKTLASG FRARAADPAA NEAPSPKATA AAPMSLMGAP SPGLPNAPSH AAQKRVGV
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