| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3405 |
|---|
| Symbol | |
|---|
| ID | 6311441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3632718 |
|---|
| End bp | 3634307 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642652129 |
|---|
| Product | Catalase |
|---|
| Protein accession | YP_001926091 |
|---|
| Protein GI | 188582646 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0753] Catalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.126746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA ACCGCCCGAT TCTGACGACC CGACAGGGCC ATCCGGTCCG TGACAACCAG
AGCACGCGCA CGGTCGGCGA GCGGGGGCCC GCGACGCTCG AGAACTACCA GTTCATCGAG
AAGATCACCC ACTTCGACCG TGAGCGCATT CCGGAGCGCG TGGTGCATGC CCGCGGCGCC
GGCGCCCACG GCTGGTTCGA GGCCTACGGC AAGATTGGCG ACGAGCCGGC CTCCAAGTAC
ACCCGCGCCC GCGTCCTCAA CGAGACCGGC GTGAAGACGC CGATGTTCGT GCGCTTCTCC
ACCGTGGCCG GCGCCAAGGA GAGCCCGGAG ACGGAGCGCG ACCCGCGCGG CTTCGCGGTG
AAGTTCAAGA CCGTCGAGGG CAACTGGGAC CTGGTTGGCA ACAACCTCAA GGTCTTCTTC
ATCCGCGACG CGATCAAGTT CCCCGATATG ATCCACGCGT TCAAGCCGGA CCCGGTGACG
AACCGCCAGG AGGCATGGCG CTTCTTCGAC TTCGTGGCGC AGCACCCCGA AGCGATTCAC
ATGGTGACGT GGCTGAAGTC GCCCTGGGGC ATCCCGGCGA ACTACCGCGA GATGGAAGGC
TCGGGCGTCA ACACCTACAA GCTCGTCAAC GACAAGGGCG AGGCGGTGCT GTGCAAGTTC
CACTGGCAGC CCAAGCAGGG CGTCCGCAAC CTGACCTCGG CGCAGGCGTC CGAGATCCAG
GCCAAGGATG TCGGCCACGC GACCCGTGAC CTCTACGACA ACATCTCCGC CGGCAACTTC
CCCGAGTGGG AGTTCTGCGT GCAGATCATG CCCGACGGCC CGAACGACCA CCTCTCGTTC
GACCCGCTGG ACGACACGAA GCGTTGGCCC GAGGATCAGT TCCCGCTGCT GCCGGTGGGC
CGCATGGTGC TCGACCGCGT GCCGGACAAC TTCTTCGCGG AGGTGGAGCA GTCGGCCTTC
GGCACCGGCG TGCTCGTGGA CGGCATCGAC TTCTCGGACG ACAAGATGCT CCAGGGGCGC
ACGCTGTCCT ACTCGGATAC GCAGCGTTAC CGCGTCGGCG CCAACTACCT GCAGCTTCCG
ATCAACGCGC CGCAGCCCGG CGTGAAGGTC TACTCGAACC AGCGCGACGG TCAGATGACC
TACGGCGTCG ACGGCACGGG CCAGAACCGG CACATCAACT ACGAGCCCTC GACGCTCGGC
GAGGGGCTCG CCGAGGCGCC GAAGAAGACC GAGTACCACC AGCCGGTGGA GGGGCGTCTC
GGCCGCTACC AAACCTCGCG TACCGAGGAC GACTACGCCC AGGCGGGCCA CCGCTACCGG
ACCTTCGAGG ACTGGGAGCG TGAGGATCTG ATCGCCAACC TCGTCGCGGA CATGAAGCAG
TGCCCGGAGC CGATCCAGCT ACGGATGGTC TGGCACTTCT GGCACGCCGA CGAGGATTAC
GGCCGCCGCG TCGCCGAGGG CGCCGGGATC GATCTGGAGA AGGCCAAGGC CCTGCCGCCG
CTGCCGGGCC GCGCCGCCCC GCACAAGCGC CTCCAGGCTG AGACCTACAC CGAGGGCGGC
AACGCCCCGC AGAAGGTCGC CGCGGAGTAA
|
|---|
| Protein sequence | MSENRPILTT RQGHPVRDNQ STRTVGERGP ATLENYQFIE KITHFDRERI PERVVHARGA
GAHGWFEAYG KIGDEPASKY TRARVLNETG VKTPMFVRFS TVAGAKESPE TERDPRGFAV
KFKTVEGNWD LVGNNLKVFF IRDAIKFPDM IHAFKPDPVT NRQEAWRFFD FVAQHPEAIH
MVTWLKSPWG IPANYREMEG SGVNTYKLVN DKGEAVLCKF HWQPKQGVRN LTSAQASEIQ
AKDVGHATRD LYDNISAGNF PEWEFCVQIM PDGPNDHLSF DPLDDTKRWP EDQFPLLPVG
RMVLDRVPDN FFAEVEQSAF GTGVLVDGID FSDDKMLQGR TLSYSDTQRY RVGANYLQLP
INAPQPGVKV YSNQRDGQMT YGVDGTGQNR HINYEPSTLG EGLAEAPKKT EYHQPVEGRL
GRYQTSRTED DYAQAGHRYR TFEDWEREDL IANLVADMKQ CPEPIQLRMV WHFWHADEDY
GRRVAEGAGI DLEKAKALPP LPGRAAPHKR LQAETYTEGG NAPQKVAAE
|
|---|
| |