Gene Mpop_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3402 
Symbol 
ID6311438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3628719 
End bp3629873 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content72% 
IMG OID642652126 
ProductCBS domain containing protein 
Protein accessionYP_001926088 
Protein GI188582643 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.224461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG ACCGAAGTCG CGGCGCGGCC CTGGCCGCGC CAGCCGCGGA CGCGGAACCG 
CCCCCACGCG AGGCGTGGTA CGATCGTCTG CTGAACGTCT TCAACCTGCG TCCGCGCGAC
TCCCTTCGCA CCGATATCGA GGAGGCCCTG GCCGAGCCCG ATACGGGCGA AGACGCCTTC
TCCCCCCTCG AACGGGCCAT GCTCAAGAAC GTGCTCGGCC TGCACAAGGT ACGGGTGGAC
GACGTGATGC TGCCCCGCGC CGACATCGTG GCGGTGGCCA GCGACACGAG CCTCGGCGAT
CTCCTGAGGC TGTTCCGCAC CGCCGGCCAT TCGCGCCTGC CGGTCTACGG CGAGACCCTC
GACGATCCCC GCGGCATGGT CCACATCCGC GATTTCGTGG AGTATCTCGC GACGCAGGCC
GAGGCGGCCC CACGCCGTCC GGCACCGCGG GTCGTGAACG ACGGCGAGGC TGACGGAGAG
AGCAAGCCCG CACCGCGCCC GCGCCGCACC GCCTCCGCCC GCGGGGCGCT CCGCAGCCTC
GATCTCGGCA AGGTCGATCT CACCGCGACG CTCGCCTCCA CCCGCATCCA GCGCCCGGTG
CTGTTCGTGC CGCCCTCCAT GCCGGCCATC GACCTGCTGG TGCGGATGCA GGCCACGCGC
ACCCACATGG CGCTCGTCAT CGACGAGTAT GGCGGCACCG ACGGGCTGAT CTCGATCGAG
GATCTGATCG AGATGGTGGT CGGCGACATC GAGGACGAGC ACGACGTGGC CGAGGGCCGG
CTCGTCAACC GCATGGAAGG CGAGGCGGAA GCCTACATCG CCGACGCCCG CGCCGGGCTC
GCGGAGGTGT CGGAGGCCAC CGGCCTCGAT CTCGCCGCCG CCTTCGGCGA GGTGGCCGAG
GAAATCGACA CGATCGGCGG CCTGGTCGTC ACCCTGGCCG GGCGGGTGCC CGAGCGCGGC
GAGCGGATCG CCGGGCCCGA GGACATCGAG TTCGAGGTAC TCGATGCCGA TCCCCGGCGG
GTGAAGCGGA TCAAGCTCCA GCGCGCCCCG GCCAAGATCG GCACCGTGGT GCCGCTCGCG
CTGCCGCCGC CGCGCGCGGT GCCGCACAGC TCGGCCGAAC CGGATACGGC ACAGGCTGCC
GAAGCCGGCC GGTAA
 
Protein sequence
MTNDRSRGAA LAAPAADAEP PPREAWYDRL LNVFNLRPRD SLRTDIEEAL AEPDTGEDAF 
SPLERAMLKN VLGLHKVRVD DVMLPRADIV AVASDTSLGD LLRLFRTAGH SRLPVYGETL
DDPRGMVHIR DFVEYLATQA EAAPRRPAPR VVNDGEADGE SKPAPRPRRT ASARGALRSL
DLGKVDLTAT LASTRIQRPV LFVPPSMPAI DLLVRMQATR THMALVIDEY GGTDGLISIE
DLIEMVVGDI EDEHDVAEGR LVNRMEGEAE AYIADARAGL AEVSEATGLD LAAAFGEVAE
EIDTIGGLVV TLAGRVPERG ERIAGPEDIE FEVLDADPRR VKRIKLQRAP AKIGTVVPLA
LPPPRAVPHS SAEPDTAQAA EAGR