Gene Mpop_3387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3387 
Symbol 
ID6311412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3615000 
End bp3615890 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content67% 
IMG OID642652111 
Productdihydrodipicolinate synthase 
Protein accessionYP_001926073 
Protein GI188582628 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CCCACGCCCG CCTCCGCGGC TCGATGACCG CGCTCGCGAC CCCTTTCCGC 
GACGGCGAGT TCGACGAGGC GGCCTTCCGG AAATTCGTGA ACTGGCAGAT CGAGCAGGGC
ACCCACGCCC TGGTGCCGAC CGGCACCACC GGCGAGAGCC CGACGCTGAG CCACAGCGAG
CATGACCGCG TGGTCGAGAT CTGCGTCGCC GAGGCCGCGG GCCGGGTGCC CGTGATCGCG
GGCGCCGGCT CGAACTCGAC GCGGGAGGCC GTCGCACGGG CTCGTCATGC GGAGAGCGTC
GGCGCAGATG CAGTGCTCAC CGTTACCCCC TACTACAACA AGCCGACGCA GGAGGGGATG
TACGCCCACT TCAAGGCGGT GAACGACGCC GTCGGCATCC CGATCATCAT CTACAACATT
CCCGGCCGGT CCGTGGTCGA CATGAGCGTC GATACGATGA AGCGGCTGTT CGAGTTGAAG
AACATTGCCG GCGTGAAGGA TGCTACGGCC AAGATCGACC GCGTCAGCCT CCAGCGGCAG
GCTTTGGGAG AAGACTTCAT CCAGCTTTCT GGCGAAGATG CGACGGCGCT CGGATTCAAT
GCCCAGGGCG GGGTCGGCTG TATCTCCGTG GTGTCGAATG TCGCGCCCCG GCTCTGCGCC
GATCTTCAGG AGGCAACGCT CGCGGGCGAT TACGCGAAGG CCCTGAAAAT CCAGGACCGG
CTGATGCCGC TGCACGTGCA GATGTTCTAC GAGTCGAACC CGGTGCCGGC GAAATACGCG
CTCTCGCGCC TCGGGCTGAT GTCGGAAGAG GTGCGCCTGC CGCTGGTGCC GGCGACGGAA
GGGTGCCGCC GCGCGGTCGA TGCCGCGCTG GCCCATGCCG GCCTGATCTG A
 
Protein sequence
MTDTHARLRG SMTALATPFR DGEFDEAAFR KFVNWQIEQG THALVPTGTT GESPTLSHSE 
HDRVVEICVA EAAGRVPVIA GAGSNSTREA VARARHAESV GADAVLTVTP YYNKPTQEGM
YAHFKAVNDA VGIPIIIYNI PGRSVVDMSV DTMKRLFELK NIAGVKDATA KIDRVSLQRQ
ALGEDFIQLS GEDATALGFN AQGGVGCISV VSNVAPRLCA DLQEATLAGD YAKALKIQDR
LMPLHVQMFY ESNPVPAKYA LSRLGLMSEE VRLPLVPATE GCRRAVDAAL AHAGLI