| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3358 |
|---|
| Symbol | |
|---|
| ID | 6311336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3585889 |
|---|
| End bp | 3586398 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642652082 |
|---|
| Product | 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| Protein accession | YP_001926044 |
|---|
| Protein GI | 188582599 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0054] Riboflavin synthase beta-chain |
|---|
| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTCCC AACGCCGGGA CGCGGACGCG CCCAAGAGCA TTCTCGAGAG CCTCGCCGGC
ACCCGCGTGC TGGTGGTGGA GGCGCGCTAC TACGACGACA TCGCCGACGA GCTGCTGGCG
GGGGCCCGCG CCGCCATCGA GGCGGTCGGC GCCGAGGCGC GGATCTTCAC CGTGCCGGGC
GCCCTCGAAA TCCCCTCGGC GATCGCGATC CTGATGGAAG CCGGTCGCAA GGCCGGGGGC
CCCTACGACG CGGCGGTGGC ACTCGGCTGC GTCATCCGCG GCGAGACCGG CCACTACGAC
ATCGTCGCGG GCGAGAGCGC CCGCGCCCTG ATGGATCTCT CCGTTTCCGA GCACCTGCCG
CTCGGCAACG GCATCCTCAC CGTCGAGACC ATGGAGCAGG CGCTCGCCCG CGCCCGGGTC
TCCGAGATGA ACAAGGGCGG CGGCGCGGCG GAGGCGGCGC TCAGCCTCCT CGCCATCAAG
CGCGCCGCCA ACCTGGAACC CGCCCGATGA
|
|---|
| Protein sequence | MVSQRRDADA PKSILESLAG TRVLVVEARY YDDIADELLA GARAAIEAVG AEARIFTVPG
ALEIPSAIAI LMEAGRKAGG PYDAAVALGC VIRGETGHYD IVAGESARAL MDLSVSEHLP
LGNGILTVET MEQALARARV SEMNKGGGAA EAALSLLAIK RAANLEPAR
|
|---|
| |