| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3336 |
|---|
| Symbol | |
|---|
| ID | 6311287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3562763 |
|---|
| End bp | 3564358 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642652060 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001926022 |
|---|
| Protein GI | 188582577 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0784] FOG: CheY-like receiver
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA TCCCCGAGAA ACGACCCCAC GGCGCCCATC CGAGCGTCGA GACCGGTGCG
GCCGGCCACG AGTTTGACGC GGGCAGCGAC ATCTTCTTCG CCGCGGTGTC GATGACGCGG
ATGCCGATGG TGGTGGTCGA TCCGAACCAG AACGACCACC CGATCGTCTT CGTGAACCAA
GCCTTCCTGG AGATGACCGG CTACGCGAAG GCGGAGGTGA TCGGCCATAA CTGCCGCTTC
CTGCAGGGCC CCGAGACCGA CCCGGCCACG CGGGCGCAGG TCCGCGCGGC GATCGAGCAG
CGGCGCGACA TCGCCACCGA GATCCTCAAC TACCGCAAGG ACGGCTCGTC GTTCTGGAAC
GCGCTGTTCG TGAGCCCGGT CTACAACGCG GCCGGCGACC TCGTGTACTT CTTCGGCTCC
CAGCTCGACA TCACCCGGCG TCGGCAGGCG GAGGAGGCGC TGCATCAGGC GCAGAAGATG
GAGGCGATCG GCCAGCTCAC CGGCGGCATC GCCCACGACT TCAACAACCT GTTGCAGGTG
ATCCTCGGCT ACGCCGACTC GCTCGCCACG AATCTGGAGC GCCCGGATGC CGACCGGGGC
CGCATGGGCC GCGCTGTCGG CAACATCCGC GAGGCGGCCG AGCGCGCCTC GACCCTGACG
CAGCAACTGC TCGCATTCGC CCGCAAGCAG CGGCTCGACG GCCGCACCCT CAACCTCAAC
ACGCTCATCT CCGAGATGTC GGAGCTGGGC GGGCGCACGC TGGGCGATGC GGTGACGATC
GAGACCGATC TCGCCCCCGA CCTTCGGCCG TGCCGGATCG ACCGGACCCA GGCCGAAACG
GCCCTGCTCA ACGTGCTCAT CAACGCCCGC GACGCCATGC CGGAGGGCGG GCATCTCACC
ATCGCGACCC GCAACGAGGA ACCCGGCCGT CCGGACGGAC AGCGCCTCGT CAGCGTCTCG
GTCACCGATA CCGGCGCGGG CATCCCCTCG GACGTGCTCG CGCGGGTGAT GGACCCGTTC
TTCACCACCA AGGAGGAAGG CAAGGGCACG GGGCTCGGCC TGTCGATGGT CTACGGCTTC
GCCAAGCAGT CCGGCGGCTT CGCGCAGATC GAGTCGGTGA TGGGGGAGGG GACCACCGTG
CGCCTGTCCT TCCCGGCGAC CGAGGCGGCG GAGGACGAGG CGAGCGAGGA GGCCGCTCCC
GCCGAGGCGC GGCCGGGCTC CGAGACGATC CTGATCGTGG ACGACCGCGC CGATGTCGCC
GAACTCGCCC GGGCGATCCT GCGCGATTAC GGCTACGGCA CCCTGATGGC CCGCCACGGC
CGCGAGGCGC TGGAGATCCT GGCCGACCAT TCGGAGATCG ACCTGCTGTT CTCCGACCTA
ATCATGCCCG GCGGCATGGA CGGGCTCTCG CTCGCCCGCG AGGCGCATCG CCGCCATCCC
GCCCTCAAGA TCCTGCTCAC CACCGGCTAC GCCGAGGCGA GCCTGGAGCG AACCGGCCTC
GCGCGTCCGG AGTTCGATAT CCTGAACAAG CCGTACCGCC GCGCCGAGCT GATCCGGCGG
GTGCGGGCGG CTCTCGACGC CACAGGCCCG GCCTGA
|
|---|
| Protein sequence | MTDIPEKRPH GAHPSVETGA AGHEFDAGSD IFFAAVSMTR MPMVVVDPNQ NDHPIVFVNQ
AFLEMTGYAK AEVIGHNCRF LQGPETDPAT RAQVRAAIEQ RRDIATEILN YRKDGSSFWN
ALFVSPVYNA AGDLVYFFGS QLDITRRRQA EEALHQAQKM EAIGQLTGGI AHDFNNLLQV
ILGYADSLAT NLERPDADRG RMGRAVGNIR EAAERASTLT QQLLAFARKQ RLDGRTLNLN
TLISEMSELG GRTLGDAVTI ETDLAPDLRP CRIDRTQAET ALLNVLINAR DAMPEGGHLT
IATRNEEPGR PDGQRLVSVS VTDTGAGIPS DVLARVMDPF FTTKEEGKGT GLGLSMVYGF
AKQSGGFAQI ESVMGEGTTV RLSFPATEAA EDEASEEAAP AEARPGSETI LIVDDRADVA
ELARAILRDY GYGTLMARHG REALEILADH SEIDLLFSDL IMPGGMDGLS LAREAHRRHP
ALKILLTTGY AEASLERTGL ARPEFDILNK PYRRAELIRR VRAALDATGP A
|
|---|
| |