Gene Mpop_3320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3320 
Symbol 
ID6311198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3547676 
End bp3549037 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content72% 
IMG OID642652043 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001926006 
Protein GI188582561 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.290278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.330714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAA TCCCGGTGAC GGAACGGCGT GCGTATCCCG CGCGCGAACG CGACATCCAT 
CGCAGCGACC TGCGCGAACG GGCCGGCGCC CGCCCGGCAC GCCGCGCCGG CCGCCCGAGC
GAGCCCGCGA CCGGCCCCGC CGGGCCGTCC CGCCGGGCGA CCTACGGCCT CGACGCGTTC
ACCTTCTTCA TCGCCAACCT GCAGACCGGG TTCGGGCCCT TCCTCGCCGT CTACTTCACC
CAGCAGAAAT GGACGCAGTC GGATATCGGC CTCGCCCTGA CCGTCGGCAG CCTCGTCAGC
CTGCTCGGGC AGATGCCCGG CGGCGCCTTC GTCGATGCCT CTCGCTCGAA GCGCTTCGCC
GCCGGCTTCT CGGCCTTCTG GGTCGGCGCG AGCGCGGTGA TGCTGGCGGC CCTGCCCACC
TACCTCGTCG TCATGCTGGC TATGGCGATC CACTCGGCGG CGAGCTGCGT CCTGACGCCG
GCCATCGCCG CGATCTCCAT CGGCCTCGTG GGCCACGCCC GGGCCGGTGA GCGGCTGGGG
CGCAATGCCA GCTTCTCGGC GATCGGCAAC GCACTCGGCG CCGCCGGCAT GGGCGCCATC
GGCTACTACC TGTCGAACAA CGCGGTGTTC TACCTCGCCG GCCTGCTGGT GATCCCGGCG
CTTGTCTCGC TGTCGTTCAT TCCGTCCGGC CGTGCCACGG AAGCCGGCAA GCCGCGGCCG
GCGGTTCGCG AGCCGGAGCC GCGCGAGGCC GGCGGCGTCG CGGTGCTCCT CAAGAACCGG
GCTCTGCTGT GCTTCGCCGG CTGCATGGTA TTGTTCTTCC TCGCCAACGC CGCGATGCTG
CCGCTGGTGG GCAGCGTGAT GACCCTGCGC GCCAGCGAGA CCGCCACGGC TCTGGTGGCC
GCCTGCATCA TGGTCCCGCA GGCCGTCCTC GCCCTAACCG CCCCCTTCGT CGGGCGCCTC
GCCCAGAGCT GGGGGCGCAA GCCGCTCCTC GTGATCGGCT TCGCGGCCTT GCCCGTCCGC
GGACTGCTCT TCGCCTTCGT CAGCGACCCC TACTGGATGG TCGCGATCCA GGTCTTCGAT
GGCATCTCGG CCTCCGTGCT GGGCGTCATG GTCCCGCTGA TCGTCTCCGA CGTCACCCGC
GGCACCGGCC GCTTCAACAC CGCGCTCGGC GCGGTCGGCA CCGGCATGGG TATCGGCGCC
GCCCTCTCCA CGGCGCTGGC GGGCTTCATG GCCGACGAAC TCGGCAGCCG CACCGCGTTC
CTGGGCCTCG CCGTCGTCGG TGCCGCCGGG CTCGCCCTCG TGCTGCTGAT CATGCCGGAG
ACGCGGCGGC AAGACGGGGA CGAGGCGCGG GACCCGTCTT GA
 
Protein sequence
MTAIPVTERR AYPARERDIH RSDLRERAGA RPARRAGRPS EPATGPAGPS RRATYGLDAF 
TFFIANLQTG FGPFLAVYFT QQKWTQSDIG LALTVGSLVS LLGQMPGGAF VDASRSKRFA
AGFSAFWVGA SAVMLAALPT YLVVMLAMAI HSAASCVLTP AIAAISIGLV GHARAGERLG
RNASFSAIGN ALGAAGMGAI GYYLSNNAVF YLAGLLVIPA LVSLSFIPSG RATEAGKPRP
AVREPEPREA GGVAVLLKNR ALLCFAGCMV LFFLANAAML PLVGSVMTLR ASETATALVA
ACIMVPQAVL ALTAPFVGRL AQSWGRKPLL VIGFAALPVR GLLFAFVSDP YWMVAIQVFD
GISASVLGVM VPLIVSDVTR GTGRFNTALG AVGTGMGIGA ALSTALAGFM ADELGSRTAF
LGLAVVGAAG LALVLLIMPE TRRQDGDEAR DPS