Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3320 |
Symbol | |
ID | 6311198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 3547676 |
End bp | 3549037 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642652043 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001926006 |
Protein GI | 188582561 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.290278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.330714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCAA TCCCGGTGAC GGAACGGCGT GCGTATCCCG CGCGCGAACG CGACATCCAT CGCAGCGACC TGCGCGAACG GGCCGGCGCC CGCCCGGCAC GCCGCGCCGG CCGCCCGAGC GAGCCCGCGA CCGGCCCCGC CGGGCCGTCC CGCCGGGCGA CCTACGGCCT CGACGCGTTC ACCTTCTTCA TCGCCAACCT GCAGACCGGG TTCGGGCCCT TCCTCGCCGT CTACTTCACC CAGCAGAAAT GGACGCAGTC GGATATCGGC CTCGCCCTGA CCGTCGGCAG CCTCGTCAGC CTGCTCGGGC AGATGCCCGG CGGCGCCTTC GTCGATGCCT CTCGCTCGAA GCGCTTCGCC GCCGGCTTCT CGGCCTTCTG GGTCGGCGCG AGCGCGGTGA TGCTGGCGGC CCTGCCCACC TACCTCGTCG TCATGCTGGC TATGGCGATC CACTCGGCGG CGAGCTGCGT CCTGACGCCG GCCATCGCCG CGATCTCCAT CGGCCTCGTG GGCCACGCCC GGGCCGGTGA GCGGCTGGGG CGCAATGCCA GCTTCTCGGC GATCGGCAAC GCACTCGGCG CCGCCGGCAT GGGCGCCATC GGCTACTACC TGTCGAACAA CGCGGTGTTC TACCTCGCCG GCCTGCTGGT GATCCCGGCG CTTGTCTCGC TGTCGTTCAT TCCGTCCGGC CGTGCCACGG AAGCCGGCAA GCCGCGGCCG GCGGTTCGCG AGCCGGAGCC GCGCGAGGCC GGCGGCGTCG CGGTGCTCCT CAAGAACCGG GCTCTGCTGT GCTTCGCCGG CTGCATGGTA TTGTTCTTCC TCGCCAACGC CGCGATGCTG CCGCTGGTGG GCAGCGTGAT GACCCTGCGC GCCAGCGAGA CCGCCACGGC TCTGGTGGCC GCCTGCATCA TGGTCCCGCA GGCCGTCCTC GCCCTAACCG CCCCCTTCGT CGGGCGCCTC GCCCAGAGCT GGGGGCGCAA GCCGCTCCTC GTGATCGGCT TCGCGGCCTT GCCCGTCCGC GGACTGCTCT TCGCCTTCGT CAGCGACCCC TACTGGATGG TCGCGATCCA GGTCTTCGAT GGCATCTCGG CCTCCGTGCT GGGCGTCATG GTCCCGCTGA TCGTCTCCGA CGTCACCCGC GGCACCGGCC GCTTCAACAC CGCGCTCGGC GCGGTCGGCA CCGGCATGGG TATCGGCGCC GCCCTCTCCA CGGCGCTGGC GGGCTTCATG GCCGACGAAC TCGGCAGCCG CACCGCGTTC CTGGGCCTCG CCGTCGTCGG TGCCGCCGGG CTCGCCCTCG TGCTGCTGAT CATGCCGGAG ACGCGGCGGC AAGACGGGGA CGAGGCGCGG GACCCGTCTT GA
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Protein sequence | MTAIPVTERR AYPARERDIH RSDLRERAGA RPARRAGRPS EPATGPAGPS RRATYGLDAF TFFIANLQTG FGPFLAVYFT QQKWTQSDIG LALTVGSLVS LLGQMPGGAF VDASRSKRFA AGFSAFWVGA SAVMLAALPT YLVVMLAMAI HSAASCVLTP AIAAISIGLV GHARAGERLG RNASFSAIGN ALGAAGMGAI GYYLSNNAVF YLAGLLVIPA LVSLSFIPSG RATEAGKPRP AVREPEPREA GGVAVLLKNR ALLCFAGCMV LFFLANAAML PLVGSVMTLR ASETATALVA ACIMVPQAVL ALTAPFVGRL AQSWGRKPLL VIGFAALPVR GLLFAFVSDP YWMVAIQVFD GISASVLGVM VPLIVSDVTR GTGRFNTALG AVGTGMGIGA ALSTALAGFM ADELGSRTAF LGLAVVGAAG LALVLLIMPE TRRQDGDEAR DPS
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