| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3274 |
|---|
| Symbol | |
|---|
| ID | 6311085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3498404 |
|---|
| End bp | 3499738 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642651997 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_001925960 |
|---|
| Protein GI | 188582515 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.470678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCC CCCCGACACC CGCGCTGCAC GCCCTCCGCC GCGGCGATCT CGCCGGGGCG
CGGGAGCTGC GCCTAAGCGG ATCCCTCAGC GAATTCCCGC CGGAAATCTT CGGGCTCGCC
GAGACGCTGG AGGTGCTCGA CCTCAGCGGC TGCGGCCTCA CCGACCTCCC GGCGGATCTC
GGCCGGCTCA AGCGGCTGCG CGCGCTGTTC TGTTCGGGCA ACCGCTTCGA GCGGCTGCCG
CCCGCCCTCG GCGACTGCGC CGCCCTGAGC CAGATCGGGT TCCGCGCCAC CGGGTTGCGG
GAGGTGCCGG CCGAGGCGCT GCCGCCGGCC CTGCGCTGGC TCACGCTCAC CGATAACCGG
ATCGAGCACC TGCCCGAGGC GCTGGGCCAG CGCCCGCAAT TGCAGAAGCT GATGCTGGCG
GGCAACCGGC TGCGGGCGCT GCCGCCCACG CTCGCGGACG CGCACCAGCT CGAATTGCTG
CGCCTGTCCG CCAACGGCTT CGAGGCGCTG CCCGCTTGGC TCGGCGAGTT GCCGCGGCTC
GCCTGGATCG CCTGGGCCGG CAACCCGCTC GACGGGGAGC CGGCGCCGGC CGCGGTGCCG
CATGTCGCCT GGGAGGCGCT CGATCTCGGC CCCTGCCTCG GCGAGGGAGC CTCGGGGCGG
ATCCACCGGG CGCTGTGGCG CCGCGCCGAG CCGGCCGAGG CGGTCGCGGT GAAGCTGTTC
AAGGGCCGCA TGACCAGCGA CGGGCTGCCC GAGCGGGAAA TGGCGGCCTG CCTCGCCGCC
GGCCGCCACC CCAACCTCAC CGGGGCGCTC GGGCGGATCG AGGGGCATCC GGAGGGGGTC
CAGGGGCTGC TGATGCCGCT GATCCCGGAG GACTGGCGGG TTTTGGCCGG GCCGCCGAGC
CTGGAGAGCT GCAGCCGCGA CGTCTACGCG CCGGATCTCG CCCTGGCGCC GGAGACGGCT
CTCCGCATCG CCGCCTCGGT GGCGCGGGCG GCGGCGCATC TCCACGATCG GGGCGTGCTG
CACGGCGACC TCTACGGGCA CAATACGCTG TGGGACGGGC GCACCGGCGC GGCGGTGCTG
AGCGATTTCG GCGCGGCCTC GCTGCTGCCA GCGGGCGCCG CCGGCGCGCC CTGGCAGCGC
GTCGAGACGC GGGCCTGGGG CCTCCTGCTC GGCGAGCTGC TCGACCGCTG CGCGGAAAAA
CCCGCCGGGA TGGCGGATCT GCGTGCGCTG GAACGGGCCT GCCGCCAGCC CGATCCGCGG
GCGCGGCCAT CGATGGCGGC GGTCGTGCAC GCCCTATCGT CGCATTTGTC GCCGGATCGT
CACGCGGATG CTTGA
|
|---|
| Protein sequence | MDAPPTPALH ALRRGDLAGA RELRLSGSLS EFPPEIFGLA ETLEVLDLSG CGLTDLPADL
GRLKRLRALF CSGNRFERLP PALGDCAALS QIGFRATGLR EVPAEALPPA LRWLTLTDNR
IEHLPEALGQ RPQLQKLMLA GNRLRALPPT LADAHQLELL RLSANGFEAL PAWLGELPRL
AWIAWAGNPL DGEPAPAAVP HVAWEALDLG PCLGEGASGR IHRALWRRAE PAEAVAVKLF
KGRMTSDGLP EREMAACLAA GRHPNLTGAL GRIEGHPEGV QGLLMPLIPE DWRVLAGPPS
LESCSRDVYA PDLALAPETA LRIAASVARA AAHLHDRGVL HGDLYGHNTL WDGRTGAAVL
SDFGAASLLP AGAAGAPWQR VETRAWGLLL GELLDRCAEK PAGMADLRAL ERACRQPDPR
ARPSMAAVVH ALSSHLSPDR HADA
|
|---|
| |