Gene Mpop_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3259 
Symbol 
ID6311069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3482734 
End bp3484602 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content74% 
IMG OID642651981 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001925945 
Protein GI188582500 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.157895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCACTG CCGCCGTTCT CTCCGCGAAG GATTTCCGCC GGACGCTGGC CCTGATGGTC 
GGGCTCGCGG CCCTGGTGCT GGCCGGCTGG CTCGGTGGGC GGGTGGCGGA ACGCTGGGCG
CTCGCCGACC TGCGGCGCTC CGCCACCTCG GCGCTGGGGC TTCAGGTCGC CGCATTGCGG
GCCGAGATGC AGACGCAGAG CGCGCTGCCG CTCGCGCTCG CGGCCGATCC CGAGATCGAG
CGCGTCGTGG CACCGGGCCC CGATCCCGCT CTCGTCGACG GCGTGAACGG CCGACTTGCT
CAGATCGCCG CGGCGACCGG TGCGGCCGTG ATCTACGTGA TCGGCGCCGA CGGCGTGACG
GTGGCTGCGA GCAACGCGAC GGCGGAGAAG AGCTTCATCG GCCGCGATTA CGGCTTCCGG
CCCTATTTCA GGGAATCGAT GGCGACCGGC TCCGGATCGC AATTCGCCCT CGGCACGGTC
AGCGGCCGGC CGGGCTTCTA TCTCGCCCGC CGGCTGCCGC GCTCGGCCGG CGTCGTCGTG
GTCAAGATCG AGTTCGACGC GATCGAGTCG GCGTGGCGCG CGAGCCGCGA GAGCGTGTTC
GTCACCGATG CCCGCGGCAT CGTGCTGGTG GCGAGCGAGC CGGGCTGGCG CTTCAAGGCC
CTGCGCAGCA TCGACGAGGC GGAGCGCAAG CGCATCCGCG AGGCGCTGGA ATTCGGGCAG
GCGCCACTCT CTCCCCTGCC GATCCACGCC GTGGCGGAGG CGGGCGACCT CGTACGCGTC
GGCGGCACCG CCCGGCCGGC TTGGCCGGCG CTGATGCTCG ATGCTCCGAT CCCCGGCACC
GAGTGGCGCC TGCACACCCT GACCCCGATC GCCGCCGCGG TTCAGCGCGA GCGGGCGCAG
GGCTACGTCA TCGCCCTGCT GACCACGGGA CTTGCCTGGG CCGGCCTTGC CACCCTGATG
GGCCGGCGGC GGCGGATGCG GATCCGGCTC GCCGAGGCCG CCGCCCGGCG CGAGGAGCTG
GAATCTCGGG TCGCCGAGCG CACGCACGCG CTCAGCGAGG CCAACCAGCA GCTTCTCGCC
GAGATCGAGG AGCGCCGCCG CGCCGAGGCC GAGCGCGAGC GCCTGGGCCG CGAGCTGGCC
CAGGCCGGGC GGCTGGCGGC CCTCGGGCAG TTCGCCGCCA GCATGGCCCA CGAGATCAAC
CAGCCGCTCG CCGCGATCCG CTCCTACGCC GACAACACCG CGATCCTCGT CCGGCGCGGG
CGCATCGAGG ACGCGGCCGA GAACGTGTCC GCCATCGGCC GGCTGACCGA GCGCATCGGC
ACGCTCACGC GCCAGCTCAA GGGCTTCGCC CGCCGCGCGT CGGGCCGGCG CGAGCCGGTC
CGTCTCGCCG ACATCATCCA TGGGAGCCTC GAAGTGGTCT CCTGGCGCGC CGCGCAGGCC
GGTATCACCC TCGACGTGCC GCCGCCCGCG CCCGACCTCG CCGTCCTCGG CGACGGGCCG
CGGCTCGAAC AGGTCGTCGT CAACCTGCTT CAGAACGCGT TGGACGCCGT GACCGGCCGG
CCCGATCCGT GGATCGCCGT GCGGATCGAG GAGGCGGGGG AGCGGGTCGC GGTCGAGGTC
GCCGATAACG GGCCGGGCAT CCCCGAAGCC GTCCGGGCGC AGGTGTTCGA TCCGTTCTTC
ACCACGAAAT CCGAAGGGTT GGGGCTCGGT CTGGCGATCT GCCGCGGCAT CGTCGAGGAA
TGCGGCGGCA CGCTCGGCCT TCGCTCGGGC GCCGACGGCA CCACCTTCCG GATGGAGCTG
ACGCGCGCGC TCGCCCCGCC GGACGCGGCG CAGGACAGTC GGACGGCCGG GAGCCTGGAG
GCCACATGA
 
Protein sequence
MITAAVLSAK DFRRTLALMV GLAALVLAGW LGGRVAERWA LADLRRSATS ALGLQVAALR 
AEMQTQSALP LALAADPEIE RVVAPGPDPA LVDGVNGRLA QIAAATGAAV IYVIGADGVT
VAASNATAEK SFIGRDYGFR PYFRESMATG SGSQFALGTV SGRPGFYLAR RLPRSAGVVV
VKIEFDAIES AWRASRESVF VTDARGIVLV ASEPGWRFKA LRSIDEAERK RIREALEFGQ
APLSPLPIHA VAEAGDLVRV GGTARPAWPA LMLDAPIPGT EWRLHTLTPI AAAVQRERAQ
GYVIALLTTG LAWAGLATLM GRRRRMRIRL AEAAARREEL ESRVAERTHA LSEANQQLLA
EIEERRRAEA ERERLGRELA QAGRLAALGQ FAASMAHEIN QPLAAIRSYA DNTAILVRRG
RIEDAAENVS AIGRLTERIG TLTRQLKGFA RRASGRREPV RLADIIHGSL EVVSWRAAQA
GITLDVPPPA PDLAVLGDGP RLEQVVVNLL QNALDAVTGR PDPWIAVRIE EAGERVAVEV
ADNGPGIPEA VRAQVFDPFF TTKSEGLGLG LAICRGIVEE CGGTLGLRSG ADGTTFRMEL
TRALAPPDAA QDSRTAGSLE AT