Gene Mpop_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3229 
Symbol 
ID6310513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3454960 
End bp3456873 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content71% 
IMG OID642651951 
ProductExodeoxyribonuclease V 
Protein accessionYP_001925915 
Protein GI188582470 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.115754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACGC CCGTTGGGGA AGCCCTCGTT CGCCATCTCG CCCAGGACGC CGCTTTCGCT 
GGCATCGGTC CGGTCACCGC CGGCCGCCTC TGGAACAGGT TCGGCGACGA CCTCCCGCGC
GTGCTGTCCG ATGGGGATGC CGACGCCTTG GCGAGCGTCG TCGGCGAGGA GCGCGCGTCC
AGCCTCGTCA TCGCCTGGCG CGAGCGGCAG GCCCTCGGCG ACATCGTCGT ATGGCTCGGA
GAGAACGGTT TCGACATACG GCTGGCCGGG CGCATCACCG CCCTGTGGGG TGCCGAAGCG
GCCCGACGCC TGCGCGCCCG GCCGTATGAC CTCATGGCCG TGGCTCCCTG GGCCGCGGTT
GATGCCGCCG CGTGCCGGAT TGGCGTCCCT CGGGATGCGC CGGAGCGCCT GGTCGCGGCC
GTCGAGAGCG TCCTCTACGA ACGCTTCGAG GAGCATCACA CCTGGATCGC GAGCGGCGAG
CTGCTGGATG AGGTCGGGCG GAGGCTCGAT TGCGACGGCG ACAGAGCTGG CGAGGCGGTT
CACCTGGCCC TCCTGGAGGG GGCCGCCTTC GAGGCAGAGG GCGGGTACCA GGCTGCCGGT
GCCCACATGA TGGAGGGGTA TGTCGCCGGA CGCCTCCGCG CGATGACAGC TTCGGCGCCC
GTGGGCGACC TCGTCGCGCG GCCGGTCACC GGTCCCGAGG TCGAGAGATG GCTCCGGGAC
GCCGAGGCTT CAGCGGGCCC CGTCCTCGAT CCCGAACAGC GAGAGGCCGT CAGGCTGGGC
CTCCAGGCCG CCCTCGGCCT CATGGTGGGC GGGGCAGGGG TTGGCAAGAC CACGGCGTTG
CGGGCGATCT GCGGCGCGGC AGGGTCTCAC GGGCACGTGG TCCACCTCGT CGCCCTGGCC
GGCCGTGCCG CGGTGCGGAT GGGGGAGGCG ACCGCACACC CGGCCTCGAC CATCGCGGCC
TTCCTCGGGC GCATCGAATC GGGCGAGGTC GTGCTGGGTC CCCAGACCCT GGTCGTCGTG
GACGAGGCGT CGATGGTCGA CCTGCCCACC TTCTACAGGC TTCTCCGGCG CATGCCCGAG
GGTTCCCGCC TGCTCTTGGT CGGCGACGAT GCCCAGTTGC CGCCCATCGG TTTCGGGCTC
GTTTTCCACG AACTGGTCGA TGTGCCGGAC ATCCCTAAGG TCACCCTGGT CCGCGTGCAT
CGGCAAGCGG CCGCCACCGG CATCCCGCTC GTCGCCGCGG CCGTGCGGTC CGGGACGCTG
CCGGTGATGG ACAAGGAGCT GACTGGACCC GGCTTCGGCG TCGCCTTCCT CGACGGCTCC
TCCGACGGCC AGGCGACCCT CGACGATGTT GTGGATGCCG TCGCGACCTG CGGGGGGTGG
CGGGACGACC TGCGCATCCT CTGCCCGACC AAGGGCGGCC CCGTCGGGAC CGAAGCGGTC
AATGCGTGTT TCCACGACCT GCTTACCCGG GGGCACGACC GCATGCCGGG ACGTGGCTTC
GCCGCCGGTG AGCCCGTCAT GTTCCTGCGC AACGATTACC GCCTCGATCT CCGCAACGGG
TCCCTCGGGA CCGTGACGGG TTTCGACGGT CAGGTCCTGG AGGTCGATTT CGATGGCCGC
CGACACGAGC TCTCGGGCCG GAACCTCGAT GACACGGCGC TTGCCTATGC CGTTACCGTC
CACAAGGCGC AGGGATCGGC CTTCCGCCGC GTCGTGATGC CTGTGACACC GACGCGCCTG
CTGGACCGCT CGCTGGTCTA TACGGCAATA ACCCGGGCTC GGGAGCAGGC CGTGCTGGTC
GGCGACCGGC GGGCGTTCGC GAGGGCGGTT CAGGCGGCAA CGAGTGCCAA CCGCAGGTTC
ACGGGCCTGA AGGCGGCGAT GCGGAAGCAG GCGGTGGACG AGGGGGCTGC GTGA
 
Protein sequence
MLTPVGEALV RHLAQDAAFA GIGPVTAGRL WNRFGDDLPR VLSDGDADAL ASVVGEERAS 
SLVIAWRERQ ALGDIVVWLG ENGFDIRLAG RITALWGAEA ARRLRARPYD LMAVAPWAAV
DAAACRIGVP RDAPERLVAA VESVLYERFE EHHTWIASGE LLDEVGRRLD CDGDRAGEAV
HLALLEGAAF EAEGGYQAAG AHMMEGYVAG RLRAMTASAP VGDLVARPVT GPEVERWLRD
AEASAGPVLD PEQREAVRLG LQAALGLMVG GAGVGKTTAL RAICGAAGSH GHVVHLVALA
GRAAVRMGEA TAHPASTIAA FLGRIESGEV VLGPQTLVVV DEASMVDLPT FYRLLRRMPE
GSRLLLVGDD AQLPPIGFGL VFHELVDVPD IPKVTLVRVH RQAAATGIPL VAAAVRSGTL
PVMDKELTGP GFGVAFLDGS SDGQATLDDV VDAVATCGGW RDDLRILCPT KGGPVGTEAV
NACFHDLLTR GHDRMPGRGF AAGEPVMFLR NDYRLDLRNG SLGTVTGFDG QVLEVDFDGR
RHELSGRNLD DTALAYAVTV HKAQGSAFRR VVMPVTPTRL LDRSLVYTAI TRAREQAVLV
GDRRAFARAV QAATSANRRF TGLKAAMRKQ AVDEGAA