Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3229 |
Symbol | |
ID | 6310513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 3454960 |
End bp | 3456873 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642651951 |
Product | Exodeoxyribonuclease V |
Protein accession | YP_001925915 |
Protein GI | 188582470 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.115754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAACGC CCGTTGGGGA AGCCCTCGTT CGCCATCTCG CCCAGGACGC CGCTTTCGCT GGCATCGGTC CGGTCACCGC CGGCCGCCTC TGGAACAGGT TCGGCGACGA CCTCCCGCGC GTGCTGTCCG ATGGGGATGC CGACGCCTTG GCGAGCGTCG TCGGCGAGGA GCGCGCGTCC AGCCTCGTCA TCGCCTGGCG CGAGCGGCAG GCCCTCGGCG ACATCGTCGT ATGGCTCGGA GAGAACGGTT TCGACATACG GCTGGCCGGG CGCATCACCG CCCTGTGGGG TGCCGAAGCG GCCCGACGCC TGCGCGCCCG GCCGTATGAC CTCATGGCCG TGGCTCCCTG GGCCGCGGTT GATGCCGCCG CGTGCCGGAT TGGCGTCCCT CGGGATGCGC CGGAGCGCCT GGTCGCGGCC GTCGAGAGCG TCCTCTACGA ACGCTTCGAG GAGCATCACA CCTGGATCGC GAGCGGCGAG CTGCTGGATG AGGTCGGGCG GAGGCTCGAT TGCGACGGCG ACAGAGCTGG CGAGGCGGTT CACCTGGCCC TCCTGGAGGG GGCCGCCTTC GAGGCAGAGG GCGGGTACCA GGCTGCCGGT GCCCACATGA TGGAGGGGTA TGTCGCCGGA CGCCTCCGCG CGATGACAGC TTCGGCGCCC GTGGGCGACC TCGTCGCGCG GCCGGTCACC GGTCCCGAGG TCGAGAGATG GCTCCGGGAC GCCGAGGCTT CAGCGGGCCC CGTCCTCGAT CCCGAACAGC GAGAGGCCGT CAGGCTGGGC CTCCAGGCCG CCCTCGGCCT CATGGTGGGC GGGGCAGGGG TTGGCAAGAC CACGGCGTTG CGGGCGATCT GCGGCGCGGC AGGGTCTCAC GGGCACGTGG TCCACCTCGT CGCCCTGGCC GGCCGTGCCG CGGTGCGGAT GGGGGAGGCG ACCGCACACC CGGCCTCGAC CATCGCGGCC TTCCTCGGGC GCATCGAATC GGGCGAGGTC GTGCTGGGTC CCCAGACCCT GGTCGTCGTG GACGAGGCGT CGATGGTCGA CCTGCCCACC TTCTACAGGC TTCTCCGGCG CATGCCCGAG GGTTCCCGCC TGCTCTTGGT CGGCGACGAT GCCCAGTTGC CGCCCATCGG TTTCGGGCTC GTTTTCCACG AACTGGTCGA TGTGCCGGAC ATCCCTAAGG TCACCCTGGT CCGCGTGCAT CGGCAAGCGG CCGCCACCGG CATCCCGCTC GTCGCCGCGG CCGTGCGGTC CGGGACGCTG CCGGTGATGG ACAAGGAGCT GACTGGACCC GGCTTCGGCG TCGCCTTCCT CGACGGCTCC TCCGACGGCC AGGCGACCCT CGACGATGTT GTGGATGCCG TCGCGACCTG CGGGGGGTGG CGGGACGACC TGCGCATCCT CTGCCCGACC AAGGGCGGCC CCGTCGGGAC CGAAGCGGTC AATGCGTGTT TCCACGACCT GCTTACCCGG GGGCACGACC GCATGCCGGG ACGTGGCTTC GCCGCCGGTG AGCCCGTCAT GTTCCTGCGC AACGATTACC GCCTCGATCT CCGCAACGGG TCCCTCGGGA CCGTGACGGG TTTCGACGGT CAGGTCCTGG AGGTCGATTT CGATGGCCGC CGACACGAGC TCTCGGGCCG GAACCTCGAT GACACGGCGC TTGCCTATGC CGTTACCGTC CACAAGGCGC AGGGATCGGC CTTCCGCCGC GTCGTGATGC CTGTGACACC GACGCGCCTG CTGGACCGCT CGCTGGTCTA TACGGCAATA ACCCGGGCTC GGGAGCAGGC CGTGCTGGTC GGCGACCGGC GGGCGTTCGC GAGGGCGGTT CAGGCGGCAA CGAGTGCCAA CCGCAGGTTC ACGGGCCTGA AGGCGGCGAT GCGGAAGCAG GCGGTGGACG AGGGGGCTGC GTGA
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Protein sequence | MLTPVGEALV RHLAQDAAFA GIGPVTAGRL WNRFGDDLPR VLSDGDADAL ASVVGEERAS SLVIAWRERQ ALGDIVVWLG ENGFDIRLAG RITALWGAEA ARRLRARPYD LMAVAPWAAV DAAACRIGVP RDAPERLVAA VESVLYERFE EHHTWIASGE LLDEVGRRLD CDGDRAGEAV HLALLEGAAF EAEGGYQAAG AHMMEGYVAG RLRAMTASAP VGDLVARPVT GPEVERWLRD AEASAGPVLD PEQREAVRLG LQAALGLMVG GAGVGKTTAL RAICGAAGSH GHVVHLVALA GRAAVRMGEA TAHPASTIAA FLGRIESGEV VLGPQTLVVV DEASMVDLPT FYRLLRRMPE GSRLLLVGDD AQLPPIGFGL VFHELVDVPD IPKVTLVRVH RQAAATGIPL VAAAVRSGTL PVMDKELTGP GFGVAFLDGS SDGQATLDDV VDAVATCGGW RDDLRILCPT KGGPVGTEAV NACFHDLLTR GHDRMPGRGF AAGEPVMFLR NDYRLDLRNG SLGTVTGFDG QVLEVDFDGR RHELSGRNLD DTALAYAVTV HKAQGSAFRR VVMPVTPTRL LDRSLVYTAI TRAREQAVLV GDRRAFARAV QAATSANRRF TGLKAAMRKQ AVDEGAA
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