Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3223 |
Symbol | |
ID | 6310527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 3449818 |
End bp | 3451356 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642651945 |
Product | threonine dehydratase, biosynthetic |
Protein accession | YP_001925909 |
Protein GI | 188582464 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACT ACATCAAGAA GATCCTCTCC GCCCGCGTCT ACGATGTGGC CATCGAGAGC CCGCTCGATC CCATGCCGCG TCTGACGAAG CGGCTCGGCC GACCCGTTCT GCTCAAGCGC GAGGACCTGC AGCCGGTCTT CTCGTTCAAG CTGCGCGGCG CCTACAACAA GATGGCCTCG CTGCCGCGCG AGCAGTTGGA GCGCGGCGTG ATCTGCGCTT CGGCCGGCAA CCATGCGCAG GGTGTGGCGC TCGGCGCGGC CCGGCTCGGG GTGCGGGCGG TCATCGTGAT GCCGCGCACC ACGCCGGCCA TCAAGGTCGA TGCCTGCCGG GCGCGCGGCG CCGAGGTGGT GCTGCACGGC GACGCCTTCG ACGAGGCCCT GGCCGAGGCG CGCCGCCTGG AGGCGCAGTG GGGCCTGACC TTCCTGCACC CGTTCGACGA TCCCGAGGTG ATCGCGGGCC AGGGCACGAT CGGCATGGAG ATCCTGCACC AGCATACGGG GCCGATCGAG GCGATCTTCG TCCCCATCGG CGGCGGCGGC TTGGCGGCCG GGATCGCCAC CTTCGTGAAG TATCTGCGCC CCGAGACCAA GGTCATCGGC GTCGAGCCGG ACGACGCCGC TTCCATGGCC GAGGCGATCC GGGCCAGCGA ACGGGTGACC CTTCCCACCG TCGGCCTGTT CGCCGACGGC GTCGCCGTGC GGCAGGCGGG CGAGGAAACC TTCCGCCTCT GCCGCGAGCA TCTCGACGCG GTCATCACCG TCGACACCGA CGCGATGTGC GCGGCGGTCA AGGACATCTT CGACGACACC CGCGCGATCT CCGAGCCGTC GGGGGCGCTG AGTCTCGCCG GAGCCAAGGC CTGGGCGGCG CAGAACCCCG GCACGGGGCC GCTGGTGGCG ATCTCGTCGG GCGCCAACCT CAATTTCGAC CGCCTGCGCC ATATCGCCGA GCGGGCGGAG ATCGGCGAGG AGCGCGAGGT GCTGCTCGGC GTCACCATCC CCGAGCGGCC CGGCGCCTAC CGCGCCTTCA TCGCCGCTCT CGGTCCCCGC GCGATCACCG AGTTCAACTA CCGTTATGCC CAAGGCAGCG ACGCGCGCAT CTTCGTCGGC ATCAACCTGC CGGGCGGCAA GCCCGAGAAG CGCGACCTGA TCGCGGCCCT CGAAAGCGCC GGCTACCGCG TCGCCGACAT GAGCGACAAC GAGATGGCCA AGGTCCATGT CCGCTACATG GTGGGGGGGC GCGCCCAGGG TCTCGCCGAC GAGCGGCTCT ACCGCTTCCA ATTCCCCGAG CGGCCGGGCG CGCTGATGAA GTTCTTGGAG GCGTTGGGCG ACGGCTTCAA CATCAGCCTG TTCCACTACC GCAACCACGG CGCCGATTAT GGCCGGGTGC TCGCCGGGAT CGAGGTGCCG GCGGCGGAGC GACCCCGGTT CGAGGCCGCC CTCGAAGCCC TCGCCTACCC CTACGTCGAC GAGACCGACA ACCCGGCCTA CCGCCTCTTC CTCGACAATG GCCTGAGTCA GGAGGCGGTG CGCCGCTGA
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Protein sequence | MTDYIKKILS ARVYDVAIES PLDPMPRLTK RLGRPVLLKR EDLQPVFSFK LRGAYNKMAS LPREQLERGV ICASAGNHAQ GVALGAARLG VRAVIVMPRT TPAIKVDACR ARGAEVVLHG DAFDEALAEA RRLEAQWGLT FLHPFDDPEV IAGQGTIGME ILHQHTGPIE AIFVPIGGGG LAAGIATFVK YLRPETKVIG VEPDDAASMA EAIRASERVT LPTVGLFADG VAVRQAGEET FRLCREHLDA VITVDTDAMC AAVKDIFDDT RAISEPSGAL SLAGAKAWAA QNPGTGPLVA ISSGANLNFD RLRHIAERAE IGEEREVLLG VTIPERPGAY RAFIAALGPR AITEFNYRYA QGSDARIFVG INLPGGKPEK RDLIAALESA GYRVADMSDN EMAKVHVRYM VGGRAQGLAD ERLYRFQFPE RPGALMKFLE ALGDGFNISL FHYRNHGADY GRVLAGIEVP AAERPRFEAA LEALAYPYVD ETDNPAYRLF LDNGLSQEAV RR
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