Gene Mpop_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3212 
Symbol 
ID6310536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3442288 
End bp3443172 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content73% 
IMG OID642651935 
ProductOHCU decarboxylase 
Protein accessionYP_001925899 
Protein GI188582454 
COG category[R] General function prediction only
[S] Function unknown 
COG ID[COG2351] Transthyretin-like protein
[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase
[TIGR03164] OHCU decarboxylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTGA CCCTCGCCGC GCTCAACACC GCCCCCACGG AGGCGTTCGT CGCGTCGCTC 
GGCGCGATCT TCGAGCATGC GCCCTGGGTC GCCGAGGCCG CCGCGGCCCA TCGGCCGTTC
GGCAGCGTCG AGGCGCTTTT CGTGGCGATG CGCGAGGCGG TGGTTGCGGC GCCCGAGGCG
CGGCGGCTCG CCCTGTTGCA GGGACACCCC GAACTTGCTG GGCGCTCGGC CCGGGCCGGC
ACCATCGCCG CCGCCTCCAT CGCCGAACAG GCCGCCGCCG GCCTCGACCG GCTCAGCGAG
GGCGAATACG CACGGTTCGC GACGCTGAAC GCCGCCTATG CCGAGAAATT CGGCTTCCCC
TTCATCCTCT GCATCAAGCG GCACGGCCGC GCCTCCCTGC TGCGGCAGTT CGAGGCCCGG
CTGGCGAGCG ATGCCGCGCG CGAGCGGCAG ACGGCGGAGG CGGAAGTCTT CCGCATCGCC
GCGATCCGCC TCGATGCCCT GGTGGCGGGC GAGGGCCGAT TGCGGGTGAC CGGACGTCTC
TCGACCCACG TGCTCGACAC CGTCACGGGC CGTCCCGCGG CGGGCGTGGC GGTCGAACTC
GCCGAACTCG TCGGCCCGGA TGAATCCGTG ATCGTCGCCC GTGCCGTCAC CAATGCGGAC
GGGCGCACCG ATGCGCCGCT GATCGGCGGA CGGCCGGTGC CGATCGCGGC CTACGAGCTG
CGTTTCCACA TCGGCGAGCA TTTTCGCCGC GGCGGGCTCG CCCTGCCGGA GCCCGCCTTC
CTCGACACGG TGCCGATCCG CTTCGGCGTG GCCGAGCCGG AGGGGCACTA TCACGTCCCC
CTCGTTGCGA GCCCGTGGAG CTACCAGACC TATCGCGGGA GCTGA
 
Protein sequence
MPLTLAALNT APTEAFVASL GAIFEHAPWV AEAAAAHRPF GSVEALFVAM REAVVAAPEA 
RRLALLQGHP ELAGRSARAG TIAAASIAEQ AAAGLDRLSE GEYARFATLN AAYAEKFGFP
FILCIKRHGR ASLLRQFEAR LASDAARERQ TAEAEVFRIA AIRLDALVAG EGRLRVTGRL
STHVLDTVTG RPAAGVAVEL AELVGPDESV IVARAVTNAD GRTDAPLIGG RPVPIAAYEL
RFHIGEHFRR GGLALPEPAF LDTVPIRFGV AEPEGHYHVP LVASPWSYQT YRGS