Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3179 |
Symbol | |
ID | 6310643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 3412958 |
End bp | 3413935 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642651902 |
Product | histone deacetylase superfamily |
Protein accession | YP_001925866 |
Protein GI | 188582421 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTGG CCCGGCATCT CCGTCTCGCG CACCCGGGAG AAACGGCCCT GAGCACCCTG TACGTCACCC ATCCGAGCGC GCTGGAACAC GCGGTTCCCA CCGGCCATCC GGAGCGGCCC GCCCGCATGC AGGCGGTCGA GCGCGCCCTC GAGGACGAGC GCTTCGCCGC CCTGGTGCGC TGCCACGCGC CGAAGGCCGA GGCTTCCGTC GCCGAACTCG TCCACCCGGC GGCCTTCGTC GAGACCATCG TCGCCGCCTC GCCCGACGAG GGCTTCTTCC AGATCGACGG CGACACGCTG ATGTCGCCCG GCTCGCTCAA CACCTGCCTG CACGCCATCG GCGGATCGAA TCACGCGGTC GATGCGGTGA TGAAGGGCGA GTGCGCCAAC GCCTTCGTGG CCATGCGCCC GCCCGGCCAT CATGCCGAGC GCGAGCGCGC CATGGGCTTC TGCCTGTTCA ACCATGCGGC GATCGCCGTG CGCCATGCCC AGAAGGCGTT CGGTGCCACC CGCGTCGCCC TGGTGGATTT CGACGTCCAC CACGGCAACG GCTCGCAGGA CATCTTCTGG TCCGACAAAA GCGTGATGTA CGCCTCGACC CACCAGATGC CGCTGTTCCC CGGTTCGGGC GCGACGGGGG AGCGGGGCGA CCACGACACC ATCGTCAACG CGCCGCTCAA GGCCTTCGAC GGCAGCGAGA TCTTCCGGGA AGCCTTCGAG GCGCGGATCC TGCCGCGGCT CGACGCGTTC GCGCCGGATC TCGTGGTGAT CTCGGCCGGG TTCGACGCGC ACAAGCTCGA CCCGCTGGCC AATATCCAGC TCGAAGAGGC GGATTTCGGC TGGGCGACGC GCCGGCTGAT GGAGGTCGCG GACCGTCACG CGGGCGGCCG GGTCGTGTCG ATCCTGGAGG GCGGCTACAG CCTCGACGGG CTCGCCCGCT CGGTCGCCGC GCATGTGGAC GCGCTGATGG GGCGGTGA
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Protein sequence | MAVARHLRLA HPGETALSTL YVTHPSALEH AVPTGHPERP ARMQAVERAL EDERFAALVR CHAPKAEASV AELVHPAAFV ETIVAASPDE GFFQIDGDTL MSPGSLNTCL HAIGGSNHAV DAVMKGECAN AFVAMRPPGH HAERERAMGF CLFNHAAIAV RHAQKAFGAT RVALVDFDVH HGNGSQDIFW SDKSVMYAST HQMPLFPGSG ATGERGDHDT IVNAPLKAFD GSEIFREAFE ARILPRLDAF APDLVVISAG FDAHKLDPLA NIQLEEADFG WATRRLMEVA DRHAGGRVVS ILEGGYSLDG LARSVAAHVD ALMGR
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