| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3159 |
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| Symbol | |
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| ID | 6310730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 3393521 |
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| End bp | 3394369 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642651882 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001925846 |
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| Protein GI | 188582401 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.646295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGTA TCTGCGGCTG GGCTTCGGAC CGGCCTGGAA CGGTCCGGAC ACGGCGCCTG
CTCGCTCTGG CCGTGATCGG CCTCGGCCTC GCCGGCTGCC AGAGCCGCTC GCCGGAGACG
ACGGGCTCCA TCGGCGGGCT GAACCTCCTC GGCACGAGCC GCCCCGAGCG CTCGCCCCGC
GCCGAGATCG ACGCGCTCGC GGCGCGTTAC AATTCCGACC CGAGCGATGT GCGCAACGCC
ATGCGCTATG CCGCGGCTCT GCGGGCGACC GATCAGAAAT CCCAGGCCGC GGCGGTGCTG
CAGCAGGTCG CCCTGCGCAA CCCGAAGGAC AAGGCGGTGC TCGCCGCCTA CGGCAAGAGC
CTTGCCGATG CCGGCCGCTA CCAGGAGGCC AGCGAAGTTC TCCAGAATGC CCACAGCCCG
GCCCAACCCG ATTGGCGCGT GCTCTCGGCG CAAGGCATGG TGGCCGACGA GACCGGCGAC
CACGCCCGGG CGCAGAGCCT CTACGACGCC GCCCTCAAGA TCGCGCCGAA CGAGCCGCGG
ATCCTGTCGA ATCTCGGCTT GTCCTACGCA CTCTCCCGCC AACTCGGCGA GGCCGAGACG
ACCCTGCGCC TCGCGGTCGC GCAGCCGAAG GCCGATGCGC GGGTGCGCCA GAACCTCGCC
CTGGTGCTCG GGCTCAAGGG CCGCTACGAC GAGGCGGAAC GCGTGCTGGC CCAGGATCTC
GGTCCGGCGG AAGCGGCGGC CAACGTGCAG GCCATCCGCG CCATGGCGGC CAAGCGGAGC
GCGCCGAAGA CGGCGCAGGC CGCCGATCCG GCGCCGGGGC GGCAGCTCGC CCGGACGGCG
ATCCAGTAA
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| Protein sequence | MTGICGWASD RPGTVRTRRL LALAVIGLGL AGCQSRSPET TGSIGGLNLL GTSRPERSPR
AEIDALAARY NSDPSDVRNA MRYAAALRAT DQKSQAAAVL QQVALRNPKD KAVLAAYGKS
LADAGRYQEA SEVLQNAHSP AQPDWRVLSA QGMVADETGD HARAQSLYDA ALKIAPNEPR
ILSNLGLSYA LSRQLGEAET TLRLAVAQPK ADARVRQNLA LVLGLKGRYD EAERVLAQDL
GPAEAAANVQ AIRAMAAKRS APKTAQAADP APGRQLARTA IQ
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