| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3146 |
|---|
| Symbol | |
|---|
| ID | 6310783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3381947 |
|---|
| End bp | 3383257 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642651869 |
|---|
| Product | thymidine phosphorylase |
|---|
| Protein accession | YP_001925833 |
|---|
| Protein GI | 188582388 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0213] Thymidine phosphorylase |
|---|
| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTCC CCCAGGAGAT CATCCGCGAC AAGCGCGATG GGCGCGCCCT GTCCGAGGCG
GACATCGCCG GCTTCATCGA CGGCCTGACG CGGGAGCAGG TCACCGAGGG GCAAGCGGCC
GCCTTCGCCA TGGCGGTGTT CTTCCGTGGT CTCGCCCTCG ACGAGCGCGT GGCGCTGACC
CGCGCCATGA CGCAATCGGG CACGGTCCTC GAATGGGACC TGCCCGGTCC CGTCCTCGAC
AAGCATTCCA CCGGCGGCGT CGGCGACACC GTGAGCCTGC CGCTCGCGGC GATGGTGGCG
GCCTGCGGCG GCTACGTGCC GATGATCTCG GGGCGCGGCC TCGGCCATAC CGGCGGCACC
CTGGACAAGC TCGCCAGCAT CCCCGGCTAC GACGTGACGC CGGGGCTCGA CCGCTTCCGC
GCGGTGGTTG TGCAGACCGG CTGCGCCATC ATCGGCCAGA CCGCCGACCT CGCCCCGGCC
GACCGGCGCC TCTACGCCAT CCGCGACGTG ACCGGCACCG TCGAATCGCT CGATCTCATC
ACCGCGTCGA TCCTTTCGAA GAAGCTCGCG GCGGGGCTCC AGGGCCTCGT CATGGACGTG
AAGACCGGCT CCGGCGCCTT CATGGCGGAG CTTGAGGCGG CGCGGGCTCT GGCCGAGAGC
ATCGTCACGG TAGCCAACGC CGCGGGGCTG CGCACCCGCG CCGTCATCAC CGACATGGAT
GCGCCGCTCG CCTCCTGCGC CGGCAACGCG GTCGAGGTGG CCTACGCCGT CGATTACCTC
ACCGGCCGCG CCCGCGAGCC GCGCTTCCAC GCGGTGACGC TGGCGCTCGC CGCCGAGATG
CTGGTGATCG GCGGTCTCGC CGCGGATCTC GCGGAGGCGC AGTCGCGCCT GACGGCGGCG
CTCGATTCGG GGCGGGCCTG CGAGGCGTTT TCGCGGATGG TCGCGGCGCT CGGCGGCCCC
GGCGATTTCG TGGAGGCGGC GGAGCGGCAT CTGCCGCGGG CGGCCGTGAT CCGGCCGGTC
ACCGCCGAGG TGGAAGGCAT CGTGGAGCGG ATCGATACCC GTGCCGTCGG CCTCGCCGTG
ATCGGCCTCG GCGGTGGGCG CACCCGGCCC CAGGACGCGA TCGATCCGAG CGTGGGCTTT
ACCGGTCTCG CCCGCCCGGG TGACCGGCTG GAACCGGGCG CTTCGCTTGG CACCGTCCAC
GCTGCGAACG AGACCGCGGC CGAGACGGCG GCTCGCGCCC TGCGGGCGGC CTACCGTCTC
GGCGAAGCGC GGCAGGAGCC GCGCGAGGCC GTGCTGGAGC GGTTGGGCTG A
|
|---|
| Protein sequence | MRLPQEIIRD KRDGRALSEA DIAGFIDGLT REQVTEGQAA AFAMAVFFRG LALDERVALT
RAMTQSGTVL EWDLPGPVLD KHSTGGVGDT VSLPLAAMVA ACGGYVPMIS GRGLGHTGGT
LDKLASIPGY DVTPGLDRFR AVVVQTGCAI IGQTADLAPA DRRLYAIRDV TGTVESLDLI
TASILSKKLA AGLQGLVMDV KTGSGAFMAE LEAARALAES IVTVANAAGL RTRAVITDMD
APLASCAGNA VEVAYAVDYL TGRAREPRFH AVTLALAAEM LVIGGLAADL AEAQSRLTAA
LDSGRACEAF SRMVAALGGP GDFVEAAERH LPRAAVIRPV TAEVEGIVER IDTRAVGLAV
IGLGGGRTRP QDAIDPSVGF TGLARPGDRL EPGASLGTVH AANETAAETA ARALRAAYRL
GEARQEPREA VLERLG
|
|---|
| |