| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3125 |
|---|
| Symbol | murC |
|---|
| ID | 6310862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3357453 |
|---|
| End bp | 3358859 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642651849 |
|---|
| Product | UDP-N-acetylmuramate--L-alanine ligase |
|---|
| Protein accession | YP_001925813 |
|---|
| Protein GI | 188582368 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.371479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.359984 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGC CCGAAAAGCT CGGCCCCATC CACTTCATCG GCATCGGCGG CATCGGCATG
TCCGGCATTG CCGAGGTGAT GGCCAATCTC GGCTACACGG TGCAGGGCTC GGACGCGAAC
GACAACGCCA ACGTCCGGCG TCTGTCCGAG AACGGCATCC GCACCTTCGT CGGCCACCGC
GCCGAGAACG TCGAGAACGC GGCCCTCGTC GTCGTCTCCA CCGCGATCCG CCGCGACAAT
CCGGAACTGA TCGAGGCCCG CGAGCGCCGC CTGCCGGTGG TGCGCCGCGC CGAGATGCTG
GCTGAGCTGA TGCGCTTCAA GTCCTGCGTC GCGGTGGCCG GCACCCACGG CAAGACCACG
ACGACCTCGC TCGTCGCCAC GCTGCTCGAT GCCGGCAACC TCGACCCGAC GGTGATCAAC
GGCGGCATCA TCAACGCCTA CGGCACCAAT GCCCGGATGG GCGCCGGCGA CTGGATGGTG
GTCGAGGCCG ACGAATCCGA CGGCACTTTC CTCAAGCTGC CGGCCGATGT CGCCATCGTC
ACCAACATCG ACCCCGAGCA TCTCGACCAT TTCGGCTCGT TCGACGCGAT CAAGGACGCC
TTCCGGCGCT TCATCGACAA CATCCCGTTC TACGGCTTCG CGGTGATGTG CATCGACCAC
CCGATCGTGC AGGATCTGGT CGGGCATATC GAGGACCGGC GCATCATCAC CTACGGCGAG
AATCCGCAGG CCGACGTGCG CCTCATCGAC ATCGACCTGA AGGGCGGACA GAGCCGCTTC
CGGGTCATGA TCCGCGACCG CCGCCCCGGC TTCCGCCTGG AGATGCAGGA TCTCGTCCTG
CCGATGCCGG GCCGCCACAA CGCGCTCAAC GCCACCGCGG CGCTGGCGGT CGCCCACGAA
CTCGGCGTGT CCGAGGACGC GATCCGCAAG GCTTTGGCCG GCTTCGGCGG CGTCAAGCGC
CGCTTCACCC GCACGGGCGA GTGGAACGGC GCGGCGATCT TCGACGATTA CGGCCACCAT
CCGGTGGAGA TCGCCGCGGT GCTGCGCGCG GCCCGCTCCT CGACCGACGG CAAGGTGATC
GCGGTGGTGC AGCCGCACCG CTACACCCGG CTGCAGTCGC TGTTCGAGGA TTTCTGCACC
TGCTTCAACG ACGCCGACAC GGTCATCGTC GCCCCGGTCT ACGCCGCGGG CGAGGCGCCG
ATCGAGGGCA TTGACCGCGA CTCGCTGATT GCCGGCCTCA AGGCCCGCGG CCACCGCGAC
GCCGTCGCCC TGGAGCGGCC CGAGGATCTA GCCCGGCTCG TGTCCGGCCG CGCCGAGCCG
AACGATTACG TCGTGTGCCT GGGCGCCGGC ACGATCACCC AGTGGGCCTA CGCCCTGCCG
GGGGAACTGG CGGCTTTGAA GGGGTGA
|
|---|
| Protein sequence | MKLPEKLGPI HFIGIGGIGM SGIAEVMANL GYTVQGSDAN DNANVRRLSE NGIRTFVGHR
AENVENAALV VVSTAIRRDN PELIEARERR LPVVRRAEML AELMRFKSCV AVAGTHGKTT
TTSLVATLLD AGNLDPTVIN GGIINAYGTN ARMGAGDWMV VEADESDGTF LKLPADVAIV
TNIDPEHLDH FGSFDAIKDA FRRFIDNIPF YGFAVMCIDH PIVQDLVGHI EDRRIITYGE
NPQADVRLID IDLKGGQSRF RVMIRDRRPG FRLEMQDLVL PMPGRHNALN ATAALAVAHE
LGVSEDAIRK ALAGFGGVKR RFTRTGEWNG AAIFDDYGHH PVEIAAVLRA ARSSTDGKVI
AVVQPHRYTR LQSLFEDFCT CFNDADTVIV APVYAAGEAP IEGIDRDSLI AGLKARGHRD
AVALERPEDL ARLVSGRAEP NDYVVCLGAG TITQWAYALP GELAALKG
|
|---|
| |