| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3122 |
|---|
| Symbol | |
|---|
| ID | 6310879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3353089 |
|---|
| End bp | 3354579 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642651846 |
|---|
| Product | inosine-5'-monophosphate dehydrogenase |
|---|
| Protein accession | YP_001925810 |
|---|
| Protein GI | 188582365 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0516] IMP dehydrogenase/GMP reductase |
|---|
| TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.698548 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTA TCAGCGCAGA AACGATCATC GAGGGCCTGA CCTTCGACGA CGTGCTACTG
CGCCCTGCCG CGTCCTCGGT GATGCCGGCG GAGGTCGACA TCGCGAGCCG CCTCACCCGC
ACGATCCGGC TCAATATGCC GATCATCGCG TCGGCGATGG ACACCGTCAC CGAGGCGCCG
ATGGCCATCG CCATGGCGCA GAACGGCGGG CTCGGCGTCA TTCACCGCAA TCTCGAGCCG
GCCGAGCAGG CCGAGCAGGT CCGCCTCGTC AAGAAGTACG AGTCGGGCAT GGTGCTCAAC
CCCATCACCA TCCATCCCGA CGAGACGTTG GCCGACGCCT TCGACGTGAT GAAGAAGAAC
CGAATCTCCG GCATTCCGGT GGTCGAGCGC GGCCCCAACG GCTCGCGCGG GAAGCTCGTC
GGCATCCTGA CCAACCGCGA CGTGCGCTTC GCCACCAATA CCGGCCAGCC GGTGGCCGAA
CTCATGACCC GCGACCGGCT CATCACCGTG CGCGAGGGCG TGACGCAGGA CGAGGCCAAG
CGCCTGCTGC ACCAGTTCCG CATCGAGAAG CTGCTCGTCG TCGACGACCA CTACCGCTGC
ATCGGCCTCA TCACGGTCAA GGACATCGAA AAGCAGGTCG CCTACCCGAA CGCGGTCAAG
GACGAGCAGG GCCGCTTGCG GGTCGCGGCG GCGACGACCA CGGGTGATTC CGGCTTCGAG
CGCGCCGAGC GCCTGATCGA TGCCGGCTGC GACGTGATCG TGGTCGACAC CGCCCACGGT
CATTCCCGCA AGGTGCTCGA CAGCGTCGCG CGGGTGAAGC AGCTCTCCAA CGCCGTGCAG
ATTATCGCCG GCAACGTCGC CACCGCCGAG GGCGCCCGCG CCCTGATCGA TGCCGGCGCC
GACGCGATCA AGGTCGGCAT TGGTCCGGGC TCAATCTGCA CCACCCGCAT CGTCGCGGGC
GTCGGCGTGC CCCAGCTTAC GGCGCTGATG GAGGCGGTCG AGGCGGCGCA GGGCGCCGAC
GTGCCGGTGA TCGCCGATGG CGGCATCAAG TTCTCGGGCG ATCTCGCCAA GGCGATCGCA
GCGGGTGCGT CCGTTGCGAT GCTGGGCTCG CTGCTCGCGG GCACCGACGA GGCACCGGGC
GAGGTCTTTT TGTATCAGGG CCGTTCGTAC AAAAGCTACC GCGGCATGGG CTCCGTGGGC
GCCATGGCCC GCGGCTCGGC CGACCGCTAC TTCCAGGCGG AGGTCAGCGA CACCCACAAG
CTCGTGCCGG AGGGCATCGA GGGGCAGGTG CCGTACAAGG GCCCGGTCGC GGCGGTGCTG
CATCAGCTCG CCGGCGGCTT GCGCGCCGCC ATGGGCTATG TCGGCGCGGC TACCGTGCCG
GACTTCCAGG AGCGGGCGCA GTTCGTCCGC ATCACCAATG CCGGCCTGCG TGAGAGCCAC
GTCCACGACG TGACCATCAC CCGCGAGAGC CCGAACTATC CGAGCCGTTG A
|
|---|
| Protein sequence | MARISAETII EGLTFDDVLL RPAASSVMPA EVDIASRLTR TIRLNMPIIA SAMDTVTEAP
MAIAMAQNGG LGVIHRNLEP AEQAEQVRLV KKYESGMVLN PITIHPDETL ADAFDVMKKN
RISGIPVVER GPNGSRGKLV GILTNRDVRF ATNTGQPVAE LMTRDRLITV REGVTQDEAK
RLLHQFRIEK LLVVDDHYRC IGLITVKDIE KQVAYPNAVK DEQGRLRVAA ATTTGDSGFE
RAERLIDAGC DVIVVDTAHG HSRKVLDSVA RVKQLSNAVQ IIAGNVATAE GARALIDAGA
DAIKVGIGPG SICTTRIVAG VGVPQLTALM EAVEAAQGAD VPVIADGGIK FSGDLAKAIA
AGASVAMLGS LLAGTDEAPG EVFLYQGRSY KSYRGMGSVG AMARGSADRY FQAEVSDTHK
LVPEGIEGQV PYKGPVAAVL HQLAGGLRAA MGYVGAATVP DFQERAQFVR ITNAGLRESH
VHDVTITRES PNYPSR
|
|---|
| |