| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3112 |
|---|
| Symbol | |
|---|
| ID | 6310899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3343162 |
|---|
| End bp | 3344418 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642651836 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001925800 |
|---|
| Protein GI | 188582355 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCG ACGCCGCCAT TAAGGCCCTG AAACCGAAAG AGAAATTATA CAAGATCGTG
GACCGTGACG GTATGTATGT CGTGGTCCAG CCCTCGGGCG CGATCGTCTT CCGCCTGGAC
TACCGACTAA ACGGCCGCCG GGAGACGTTG ACGCTGGGGC GCTACGGTCC CGCTGGGCTC
TCCCTGGCTC GGGCGCGTGA GAAGGTGGTC GATGCTCGAC GCGCCATTTC GGAGGGCCGC
TCGCCGGCGC AGGAAAAGCA GCGCGAGAAG CGTCGCCTCC AGGAGGCGAA GAGCTTTGGC
CAGTTCGGTG AGCGCTGGCT TCAGGAAGCG CGAATGGCGG ACAGCACGCG CGCCATGCGT
CGATCAATCT TCGAGCGCGA CATTCTTCCG GCGTTTCGCA ACCGGCTGCT GCCGGAGATC
CTGCCGGAGG ATCTGCGCGG GCTGTGCGCG AAGGTGAAGG AACGTGGCGC ACCGGCAACG
GCGGTCCACG TCAGAGACAT CGTGAAACTG GTCTTCGCTT TCGCCATCCT GCATGGCGAG
AAGGTCGCCA ACCCGGCCGA CGAAGTTGGC CCGGCGTCGA TCGCGACCTT CGTACCGAAG
GACCGATCCC TGTCTCCGGC GGAGATCCGC ATCATGCTCG GCCAGATCGA GCATGTGGCG
ACGTTGCCGA CGATCCGGCT CGGGATAAAG CTGATCCTGC TGTCGATGGT ACGAAAGAGC
GAATTGCAGG ACGCGGTTTG GGATGAGGTC GATTTCGAGA ACGCCGTCTG GTCGATTCCC
AAGGAGCGGA TGAAGCGCTC GAAAGCGCAC AACGTCTATC TGTCTCAGCA GATGCTCGAC
ATCTTCATCG CTCTCAAGAC CTGCGCCGGC AATTCCAAAT ACGTCCTGCC GTCGCGCTAT
GACGCCGACG CGCCCATGTC GCGGGCGACG TTCAACCGGA TCACGACGGC GGTGGTGGAG
CGAGCCAAGA AGGAAGGGCT GCCGCTGGAG TCCTTTACGG TTCACGATCT CCGGCGCACC
GGCTCGACCC TGTTGAACGA GTTGGGCTTC AACAGCGACT GGATCGAGAA GTGTCTGGCG
CATGAGGACG GGCGATCCTC ACGGGGCATC TACAACAAGG CGGAATACGA GCATCAGCGC
CGGCATATGA TGCAGGAATG GTCCAACCTG GTCGACGCTT GGGTCGCCGG CCAGAAATAC
ACGCCGACCC TCTATCCGCC GACGATGGAC CTGCTTACGC CCGAGCCGGA TGTTTGA
|
|---|
| Protein sequence | MLTDAAIKAL KPKEKLYKIV DRDGMYVVVQ PSGAIVFRLD YRLNGRRETL TLGRYGPAGL
SLARAREKVV DARRAISEGR SPAQEKQREK RRLQEAKSFG QFGERWLQEA RMADSTRAMR
RSIFERDILP AFRNRLLPEI LPEDLRGLCA KVKERGAPAT AVHVRDIVKL VFAFAILHGE
KVANPADEVG PASIATFVPK DRSLSPAEIR IMLGQIEHVA TLPTIRLGIK LILLSMVRKS
ELQDAVWDEV DFENAVWSIP KERMKRSKAH NVYLSQQMLD IFIALKTCAG NSKYVLPSRY
DADAPMSRAT FNRITTAVVE RAKKEGLPLE SFTVHDLRRT GSTLLNELGF NSDWIEKCLA
HEDGRSSRGI YNKAEYEHQR RHMMQEWSNL VDAWVAGQKY TPTLYPPTMD LLTPEPDV
|
|---|
| |