| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3102 |
|---|
| Symbol | |
|---|
| ID | 6310928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3329238 |
|---|
| End bp | 3331982 |
|---|
| Gene Length | 2745 bp |
|---|
| Protein Length | 914 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642651828 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001925792 |
|---|
| Protein GI | 188582347 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1483] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGGAC TTACATTACG AGAAGAATTT CGGGGGAAGC GCCTCAAGGG CACTGCCATC
GAACTATCGA ACGATCAGCA AACTGGTGCC ACTCAGATTG CTGCCAAACA GTTTCTCGAA
ATTACCTATC CTACGCATGA CCTGCTGAAG GGCATTGAGG CCGTCGGCCC CAACCAAGGC
CGCCCCGTGG TCGTGATCGG TGAGCGCGGT CTGGGTAAGT CGCACTTGAT GGCCGCGCTC
TACCATGCAG TGACTGATCC TGCTTCGACG GGGGCGTGGC TCAAGGAGTG GGCCGCCAAA
TTGGCTGACC CGAACATCGG CAACATCGCG TTGCGCGACG GGATGCACGT CATCGGCGAA
AGCCTGCACC GTCAACGCTA CAAGTTTCTG TGGGACGTGC TGTTCGAGAA TCATCCTCAC
GGCTCGTTCA TCAAGGGCAA GTGGGAAGGT CAGGGCGCAT CCAAGACCGA AATCCCATCC
GACAAGCTCA TCATCGAGCT GTTGGAGCAC AAGCCAACCA TGCTGCTGCT GGATGAATTC
CAGACGTGGT ACGACGGCCT GACGAACACC AAGCAATATC CATGGAAGCA TTGGGCGTTC
AATTTCATCC AGATCCTATC GGAGATCTCC AAGGAGCGTC CCGATCTTCT GGTGTTGGTA
ATCTCTGTGC GGAATGGAGG CAGCGACGCC TACCAGCAGG TCCATCGCGT CAACCCCGTC
GCTATTGATT TCAAAGCGGG TGGCAGCGCG GAACGCATCC AGCAGGATCG TCGCCGGATG
CTGCTTCACC GCTTGTTCGA CAACCGTCTT CAGATCGCCA GCGGCACTAT TGAATCGCTC
GTCGCGCAGC ACGTTTCCGA ATCTTTCCGT CTTCTCGACG TGCCGCCGGC CGAGCAGGAG
CGCAAACGTC AGGAATTCAC TGAGTCCTGG CCCTATGCGC CGCACTTGCT GCGTTTGCTC
GAAGAGCAGG TGCTCATCGC TACCGACGCG CAGGAAACGC GCGATCTGAT CCGAATCCTG
GCGAACCTGT TCAAGAGTCG TGGTGAGAAT GCCCCGCTGC TCACCGCGGC CGATTTCCGG
CTGGACGATG ATACCTCGGG CATTGGCGCA TTGCTTGAGG CTGTCGCGAA CCAGCACCAC
CGCACGCTGC GCGAGAAGGC TCAGCAGAAT ATCATCTCAG TGACGGAAGC GAGGCACGAT
CACGCCAGCG TTGCGCCGCA TCTGCAAGAG ATCGTCGGCG CGTTGTGGCT ACGCTCGATT
GCTGTGGGCA ATCTTGCCGG AGCGGAGCCG GCCACGCTGC AACTGGACAT CACCCGCAAT
AAGCCGGTGG ATGACAACGC TTTTCACGTC GAACTAGCGA CCATTGTTGA GAACAGTTTC
AATATCCACC AGGAAGGCAC CAAGCTGCTG TTCCGGGAGG AGGAAAACCC GCGCGCCAAG
CTGATCGCTT ATGCGCGCAA CGACAAGCTG TTCGCCGATG GAGCCGATCA AGCACAGCTC
GCGAAACAGG TCCGTTACGT CATTGCCGGC AGCGACGAGG TTGCCAAGAC CTTTCGCGTG
ATCGCTCTAC CGAGAACCTG GGCCAACGAT CCGTGGACCC TGCTCGATGA TGCCGAGCAT
CCTGACAGAT GGGACGATCG CCTTCCCATT CTCGTGCTGC CCGAGGAACC GGACAAGCTC
GATGCCACGT TGGGGCGTTG GCTCAAGGAC CAATTGCAGA AGCGTCGCAA CACCGTGCGC
TTCCTGCTAC CGCGCGCCGG CAGCACAAAC GCTTTTCTGG ACCGCGATCT GCTTATCCTC
GCGCGAGCCG AAATGAAGGC GCAGGAGTGG GGCAGCCAAA ATCCTGAATA CAGGAAGCTG
CACAAGGAAT TTGAGAGCAC CCTGCGGGAC AATCTCAAAA AGCGGTTTGA CCGCTTCGCG
GTTCTGTCGC GGTGGAATTT TGCCGACCCG GCACAATGCA AATTCAGCGT GGAGCGCCTC
GACAAACAAG GGTCGCAGAT CCCCGAGGCG ATCGAAGAGG CGTTGACCAG CGATCTCTTT
GTACCCGAGG ACTTCGAGGA GTTGGTGATC GAGTTCGCCA ACAACAACGA AGCGGTCGGC
AAGCTGCTGC GCGAGCTGCA AGAGCCGCGC CCCGCTGGCC AGGATTGTAT TCCGTGGCTG
GGCGAAACCG CGATGAAGGA GCGCCTTCTG CGCTTGTGCG CCAGGGGCAA GGTCGCTCTC
AATGTGCGCG GGATGGAATA TCTGCAAACC CATCCAGGCG AGGATGAGGA TACGGCATGG
CGGCGCCTGC GCCCCAAGCT CTCGCTCACG GGGCGGCATC TCGACGATGT GTTCGTGATG
TTGCCCTCCG CCGTGCCTGC GACGGGCGGA GCTACTCAGC CATCGCCGCC GACGACAGCA
GGAGGCGGGC TTTTCGGTGG TGATGGTACG GCTGCGCCGA CACCTCCCAC ACCACCTATG
CCGGGGGGCG ATGGAACGAC CAGTTCTCCT CCCGATCCCG CGCCGGGGGG CATCTTTGGC
GGCGGCGGCC CCACCACTCC ATCGCGTATC CCGCTCGCCA ATCCGGCTAC CTCGCCCTTG
AACCTGATCG GCAAGATCGA GAGTTGGGGT ATCGGGCCGG CCACGCGCGT CGCCGATGTG
TCGATCAAGG TGTCGGCCGC CACCGGCGCG CAGCTCAAGG AACTGCTCAG GAAGCTGCCC
GAAGGCATGA CCTTCGAGTT GAACCTTGAG AAGGAGGGCG ATTGA
|
|---|
| Protein sequence | MLGLTLREEF RGKRLKGTAI ELSNDQQTGA TQIAAKQFLE ITYPTHDLLK GIEAVGPNQG
RPVVVIGERG LGKSHLMAAL YHAVTDPAST GAWLKEWAAK LADPNIGNIA LRDGMHVIGE
SLHRQRYKFL WDVLFENHPH GSFIKGKWEG QGASKTEIPS DKLIIELLEH KPTMLLLDEF
QTWYDGLTNT KQYPWKHWAF NFIQILSEIS KERPDLLVLV ISVRNGGSDA YQQVHRVNPV
AIDFKAGGSA ERIQQDRRRM LLHRLFDNRL QIASGTIESL VAQHVSESFR LLDVPPAEQE
RKRQEFTESW PYAPHLLRLL EEQVLIATDA QETRDLIRIL ANLFKSRGEN APLLTAADFR
LDDDTSGIGA LLEAVANQHH RTLREKAQQN IISVTEARHD HASVAPHLQE IVGALWLRSI
AVGNLAGAEP ATLQLDITRN KPVDDNAFHV ELATIVENSF NIHQEGTKLL FREEENPRAK
LIAYARNDKL FADGADQAQL AKQVRYVIAG SDEVAKTFRV IALPRTWAND PWTLLDDAEH
PDRWDDRLPI LVLPEEPDKL DATLGRWLKD QLQKRRNTVR FLLPRAGSTN AFLDRDLLIL
ARAEMKAQEW GSQNPEYRKL HKEFESTLRD NLKKRFDRFA VLSRWNFADP AQCKFSVERL
DKQGSQIPEA IEEALTSDLF VPEDFEELVI EFANNNEAVG KLLRELQEPR PAGQDCIPWL
GETAMKERLL RLCARGKVAL NVRGMEYLQT HPGEDEDTAW RRLRPKLSLT GRHLDDVFVM
LPSAVPATGG ATQPSPPTTA GGGLFGGDGT AAPTPPTPPM PGGDGTTSSP PDPAPGGIFG
GGGPTTPSRI PLANPATSPL NLIGKIESWG IGPATRVADV SIKVSAATGA QLKELLRKLP
EGMTFELNLE KEGD
|
|---|
| |