| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3089 |
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| Symbol | |
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| ID | 6310955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 3312572 |
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| End bp | 3315010 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642651815 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_001925779 |
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| Protein GI | 188582334 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACC TCGCCGAATA TCGCGACCGT AATAGCCGGC TCGCCGACTT CCTGCCCTGG
GTGGCGCTGG TCGGCTCAGG TCTCGTGCTC AACAAGGACG GCAGCTTCCA GCGCACGGCG
CGCTTTCGCG GTCCCGACCT GGATTCCGCA GTCGCGGCGG AGCTGGTCGC GGTCGCCGGC
CGGCTCAACA ACGCCTTCCG TCGTCTCGGC TCAGGCTGGG CGATTTTCGT GGAAGCGCAG
CGCCATCCCT CGAACCACTA TCCCGACAGC CATTTTCCGG ATGCCGCATC GGCGTTGGTC
GACGCCGAGC GCAAGGCCGG TTTCGAGGAA GCTGGAGCGC ATTTCGAGTC CAGCTACTTC
CTCACCTTCA CCTACCTGCC GCCGGCCGAG GATGCCGCCC GTGCAGAAAG CTGGCTCTAT
GAGGGCCGTG AACAGAGGGG CCTCGATCCG CACGAGGCTC TGGGTGGCTT CACCGACCGC
ACCGACCGGC TTCTGCGCCT CATCGAAGCC TTCATGCCCG AATGCCGCTG GCTCGATGAC
GGCGAAACGC TGACCTACCT GCATGGATGC GTTTCGACGC ACCGGCATCG CGTCCGCGTT
CCCGAAACGC CGATGTATCT CGACGCGCTG CTCGCCGATC AGCCGCTCAC CGGCGGTCTG
GAGCCGCGCC TTGGGCAGGC ACATCTGCGC GTTCTCACCG TCACCGGATT CCCGACCGCG
ACGACACCGG GCCTGCTCGA CGAGCTGAAC CGGCTGGCTT TCCCCTATCG GTGGAGCACG
CGCGCGGTCC TGCTCGACAA GACCGACGCG ACCAAGCTGC TGACCAAGAT CCGGCGCCAA
TGGTTCGCCA AGCGCAAATC GGTCGCCGCG ATCCTCAAGG AGGTGATGAC CAACGAAGCG
TCCGTCCTTG TCGACACGGA CGCATCGAAC AAGGCGGCGG ACGCCGATCT CGCGCTTCAG
GAGCTGGGCG CCGACTATGC CGGCATCGCC TATGTCACGG CGACGGTGAC AGTGTGGGAC
GCTGATCCGC GCGTTGCCGA CGAGAAACTG CGGCTGGTCG AGAAGGTCAT CCAGGGCCGC
GACTTCACCG CGATGGCGGA AACCATCAAC GCGGTGGACG CCTGGCTCGG CAGTCTTCCC
GGGCATGTTT ACGCCAATGT GCGGCAACCG CCGATCTCCA CCCTCAATCT CGCCCACATG
ATCCCCCTGA GCGCCGTGTG GGCGGGGCCG GAACGGGACG AGCATTTCGC AGCGCCCCCG
CTGCTGTTCG GTAAAACCGA AGGCTCGACC CCGTTCCGGT TTTCTCTTCA CGTCGGCGAT
GTCGGCCATA CGCTGATCGT CGGCCCGACC GGCGCGGGCA AATCCGTGCT GCTGGCGCTC
ATGGCGCTCC AGTTTCGCCG CTATGCCGAC GCCCAGGTGT TCGCTTTCGA TTTTGGCGGT
TCGATCCGGG CGGCGGCCCT CGCCATGGGC GGTGACTGGC ACGACCTCGG CGGGGATCTC
AGCGACAGCG CCGCGACGAG CGTCAGTCTT CAGCCACTGG CTCATATCCA CGACGTCTCC
GAGCGCGCCT GGGCCGCCGA TTGGATCGGC GCCATCCTGA CGCGCGAAGC GGTCGCCATC
ACGCCAGAAG TGAAGGAGCA CATCTGGACG GCGTTGACCT CGCTGGCCTC GGCGCCGGTC
GAGGAACGCA CCGTCACCGG CCTCACCGTT CTGCTCCAGT CCAACGACCT GAAGCAGGCG
CTGCGTTCCT ATTGCATCGG CGGCCCCTAT GGGCGGCTGC TCGACGCCGA ACGGGAACAT
CTCGGCACGG CGACGGTCCA GGCGTTCGAG ACCGAAGGGC TGATCGGTAC CGGCGCGGCG
CCCGCGGTTC TCTCCTATCT CTTTCACCGC ATCGAGGACC GCTTCGACGG ATCGCCGGCC
CTTCTCATCA TCGACGAGGG GTGGCTCGCG CTGGACGACG ACGGCTTTGC CGGTCAGCTC
CGCGAATGGC TGAAGACGCT GCGTAAGAAG AACGCCAGCG TCATCTTCGC CACGCAGAGC
CTGTCGGACA TCGATGGCTC AGTCATCGCG CCCGCCATCA TCGAAAGCTG CCAGACCCGC
CTTCTGCTCC CGAACGAGCG CGCCATCGAA CCGCAGATCA CGGCGATCTA CCGGCGCTTC
GGCCTCAACG ACCGCCAGAT CGAGATCATC GCGCGCGCCA TGCCCAAGCG CGACTATTAC
TGCCAATCCC GGCGCGGCAA TCGCCTGTTC GAGCTGGGGC TGTCGGACGT CGCCCTCGCG
CTCTGCGCCG CTTCCTCGAA AACCGACCAA TCCGCGATCT CGCGGCTGTT CGCCGAGCAC
GGGCGGGCCG GCTTCCTCGC CGCCTGGCTC CGCCACCGCG ACGTCGGCTG GGCGGCTGAT
CTCATCCCGA CGCTCACCAA AACGGAGAAA CTGCCATGA
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| Protein sequence | MMNLAEYRDR NSRLADFLPW VALVGSGLVL NKDGSFQRTA RFRGPDLDSA VAAELVAVAG
RLNNAFRRLG SGWAIFVEAQ RHPSNHYPDS HFPDAASALV DAERKAGFEE AGAHFESSYF
LTFTYLPPAE DAARAESWLY EGREQRGLDP HEALGGFTDR TDRLLRLIEA FMPECRWLDD
GETLTYLHGC VSTHRHRVRV PETPMYLDAL LADQPLTGGL EPRLGQAHLR VLTVTGFPTA
TTPGLLDELN RLAFPYRWST RAVLLDKTDA TKLLTKIRRQ WFAKRKSVAA ILKEVMTNEA
SVLVDTDASN KAADADLALQ ELGADYAGIA YVTATVTVWD ADPRVADEKL RLVEKVIQGR
DFTAMAETIN AVDAWLGSLP GHVYANVRQP PISTLNLAHM IPLSAVWAGP ERDEHFAAPP
LLFGKTEGST PFRFSLHVGD VGHTLIVGPT GAGKSVLLAL MALQFRRYAD AQVFAFDFGG
SIRAAALAMG GDWHDLGGDL SDSAATSVSL QPLAHIHDVS ERAWAADWIG AILTREAVAI
TPEVKEHIWT ALTSLASAPV EERTVTGLTV LLQSNDLKQA LRSYCIGGPY GRLLDAEREH
LGTATVQAFE TEGLIGTGAA PAVLSYLFHR IEDRFDGSPA LLIIDEGWLA LDDDGFAGQL
REWLKTLRKK NASVIFATQS LSDIDGSVIA PAIIESCQTR LLLPNERAIE PQITAIYRRF
GLNDRQIEII ARAMPKRDYY CQSRRGNRLF ELGLSDVALA LCAASSKTDQ SAISRLFAEH
GRAGFLAAWL RHRDVGWAAD LIPTLTKTEK LP
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