Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3087 |
Symbol | |
ID | 6310953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 3311954 |
End bp | 3312286 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642651813 |
Product | Conjugal transfer protein TrbC |
Protein accession | YP_001925777 |
Protein GI | 188582332 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTCAAC GCCTGCACCA GGCCCGCCAT CACCTCGTCA CGGCTCTGTC CGTGGCCGCG CTTTCCGTGG TGATGGCCGC GCCGGCCCAT GCCTCCGGCT CGTCCATGCC GTGGGAGGCG CCGCTGCAAT CCATCCTTCA GTCGATCGAA GGCCCCGTCG CCAAGATCGT CGCCGTCATC ATCATTATCA CCACCGGCCT GACGCTGGCT TTCGGCGACA CGTCGGGCGG CTTCCGCCGG CTGATCCAGA TCGTGTTCGG TCTGTCGATC GCCTTTGCCG CATCGAGCTT CTTCCTCTCC TTCTTCTCGT TCGGCGGCGG GGCGCTGGTC TGA
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Protein sequence | MIQRLHQARH HLVTALSVAA LSVVMAAPAH ASGSSMPWEA PLQSILQSIE GPVAKIVAVI IIITTGLTLA FGDTSGGFRR LIQIVFGLSI AFAASSFFLS FFSFGGGALV
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