Gene Mpop_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3087 
Symbol 
ID6310953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3311954 
End bp3312286 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content65% 
IMG OID642651813 
ProductConjugal transfer protein TrbC 
Protein accessionYP_001925777 
Protein GI188582332 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3838] Type IV secretory pathway, VirB2 components (pilins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCAAC GCCTGCACCA GGCCCGCCAT CACCTCGTCA CGGCTCTGTC CGTGGCCGCG 
CTTTCCGTGG TGATGGCCGC GCCGGCCCAT GCCTCCGGCT CGTCCATGCC GTGGGAGGCG
CCGCTGCAAT CCATCCTTCA GTCGATCGAA GGCCCCGTCG CCAAGATCGT CGCCGTCATC
ATCATTATCA CCACCGGCCT GACGCTGGCT TTCGGCGACA CGTCGGGCGG CTTCCGCCGG
CTGATCCAGA TCGTGTTCGG TCTGTCGATC GCCTTTGCCG CATCGAGCTT CTTCCTCTCC
TTCTTCTCGT TCGGCGGCGG GGCGCTGGTC TGA
 
Protein sequence
MIQRLHQARH HLVTALSVAA LSVVMAAPAH ASGSSMPWEA PLQSILQSIE GPVAKIVAVI 
IIITTGLTLA FGDTSGGFRR LIQIVFGLSI AFAASSFFLS FFSFGGGALV