Gene Mpop_3076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3076 
Symbol 
ID6311010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3301994 
End bp3303154 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content64% 
IMG OID642651802 
Productreplication protein A 
Protein accessionYP_001925766 
Protein GI188582321 
COG category[L] Replication, recombination and repair 
COG ID[COG5534] Plasmid replication initiator protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTGC GGCAACAATC CCGATCGGAG CGCGGACAGC TCGACCTGTT TCGAGCGCTC 
CCTGGCGAGT TCGCTGCCCG AGATGCGCAG GATCTCATGG CCTATCCCTT CTTCTCCCTC
TCCAAGTCCC ATCGCACCGC ACCGATCGAT TTCTGCGCCG GCGACGTATC GATCCGCGTC
GAGGCCGTAC CCGATCACGG CATGGCGACC ATCTGGGATG CCGACATTCT GATCTGGGCG
GCGAGCCAGA TCGTCGAGGC GCGCGACGCG GGCTTGCGAA CCTCTCGGCT GATGATCGCC
ACCCCCTATG AAATCCTGAA GTTCATCGGC CGTGGGACAT CCCTGCGCGA CTATCAGCGC
CTCAAGGCCG CGCTCGACCG GCTGCAATCG ACGACGATCT GCACCTCTAT CCGTCAACCC
GCCGAGGGTC GGCGGCACCG CTTCTCGTGG ATCAACGAGT GGAAGGAACG CACCGACCGG
AACGGGAAGC CCGACGGAAT CGAGCTGATC GTACCCGACT GGTTCTACCA GGCCGTCCTC
GACGACGCGC TCGTCCTCAC GATCGACCGC GCCTATTTCG ACCTGACGGG CGGTCTCGAT
CGCTGGCTCT ATCGGATCGT CCGCAAGCAT GGCGGCCGTC AGCGCAAGGG CTGGCGGTTC
GACTTCCGTC ACCTCCACCA GAAATCGGGC GCGCTGTCGC CGTTCAAGCG CTTCGCCTTC
GAGCTGCGCG ACATCATCCG CCGCCAGCCG CTCCCGGGCT ACACACTGTT TCTGGAGATC
GACGCTGGCG GTCGCACGCT GCTCGCCTTC GAGCCGATTC CGACCTGTGG AAAAGCTGTG
GATGGCTTCG TGCCATCGGG AACCCGAGGG CGCGTGCCAT CAGGAACCGC CCCCTCGTGC
CAACGGGAAC CCAAACGGGC CTTAACCCAC GACACGAAAA GCGAAAATCG CGTCCTTAAC
TTAGAGTCTA ACAGAGAATC TAACTTTGAA GAGCGCGCGC GCGACGTGGA AAACCTCGTC
CGGCAGGCCG CAAATGCGCT CAGCGTCACC GGGAAACGGC GCGCCAACCC CTCCGCACCT
GCCAGCACCG GCTCCGGAAC GGCCGACGCC CACAGCCTTC CGCAACTCCC CTTCGATCCT
CGTGCGGGAG GCCGCCGATG A
 
Protein sequence
MAVRQQSRSE RGQLDLFRAL PGEFAARDAQ DLMAYPFFSL SKSHRTAPID FCAGDVSIRV 
EAVPDHGMAT IWDADILIWA ASQIVEARDA GLRTSRLMIA TPYEILKFIG RGTSLRDYQR
LKAALDRLQS TTICTSIRQP AEGRRHRFSW INEWKERTDR NGKPDGIELI VPDWFYQAVL
DDALVLTIDR AYFDLTGGLD RWLYRIVRKH GGRQRKGWRF DFRHLHQKSG ALSPFKRFAF
ELRDIIRRQP LPGYTLFLEI DAGGRTLLAF EPIPTCGKAV DGFVPSGTRG RVPSGTAPSC
QREPKRALTH DTKSENRVLN LESNRESNFE ERARDVENLV RQAANALSVT GKRRANPSAP
ASTGSGTADA HSLPQLPFDP RAGGRR