Gene Mpop_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3060 
Symbol 
ID6310966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3287698 
End bp3289842 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content67% 
IMG OID642651786 
ProductParB domain protein nuclease 
Protein accessionYP_001925750 
Protein GI188582305 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.658709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTG CCATTCAGAA GATCACCCTG TCGTCGGCGC GCGACATCCC CTTCAACAAG 
CTGGTGCTGA GCCAGTCCAA TGTCCGGCGC GTCAAGGCCG GCGTCTCGAT CGAGGAGCTG
GCCGAGTCCA TCGCCCGTCG CGGTCTCATC CAGAGCCTCC ATGTCCGTCC CGTCCTCGAC
GCCGATGGCG CCGAGAGCGG CATGTTCGAG GTGCCCGCCG GCGGCCGGCG CTATCGCGCG
CTCGAACTGC TCGCGAAGCA GAAGCGCCTG GCCAAGACTG TGCCGGTGCC CTGCGTCGTC
GGCGACGCCA ACAGCGACAT CCTGGTCGAC GAGGTCTCGC TGGTCGAGAA CATGGAGCGC
GCGCCGCTGC ATCCACTCGA CCAGTTCCGC GCCTTCCAGG CCATGCGCGA CAAGGGCATG
ACCGAGGAAG CCATCGCCGC CGCCTTCTTC GTCGGCGTCA ATGTCGTGAA GCAGCGCCTG
CGCCTTGCCT CCGTCTCGCC GACTTTGCTC GAGATCTATG CCGAGGATGG CATGACGCTC
GAACAGCTCA TGGCCTTCAC CGTCAGCTCC GACCATGCCC GTCAGGAACA GGTCTGGGAG
GCAGTCAAGG ATAGCTGGCA GAAGGAGCCC TATCAGATCC GCCGGATGCT GACCGAGACC
TCGGTACGCG CCTCAGACAA AAGGGCCGTC TTCATCGGCG TCGAGGCTTA TGAGGCGGCC
GGCGGCATCG TGCTGCGCGA CCTGTTCCAG TCGGACGATG GTGGCTGGCT GCAAGATCCG
GCCCTGCTCG ACAGCATGGT GGCCGACAAG CTGAAGACCA CCGCCGACGA GATCGCGAGC
GAAGGCTGGA AATGGGTCGA GGCCGCCTTG AGCTTTCCCT ACGGCCACCA GCATGGGCTT
CGCGAACTGG CTGGCGTCAC GGTCGACCTG ACCGAGGAGG AGAGCGCCAC CCGCGAAGCG
CTGCGCGACG AATACGACCG GCTCGAAGCC GAATATGCCG AGGCCGACGA GCTGCCGGAC
GAGATCGACG CACGTCTCGG CGAGATCGAA CAGGCCCTCG ACGCCTTCGA GCAGCGCCCG
ACGATCTACG ATCCGGCCGA CATCGCCGTC GCCGGCGTCT TCATCAGCCT CAATGCCGAC
GGCTCGCTGT CGGTGGATCG CGGCTATGTC CGTTCCGAGG ATGAACGTCC CGTCGAAACC
GAAGGCAGCC ATGCGCCGGA GGTTGACGGT GAAGCTGGCC AGCAGGCCGC GCCCGCCGTT
CAACGCGCCG TCATCACCAT CGGCGGCCAG CCCGCGGAGC CCGAGGACGA TGAGGAGGAC
GGCATCAAGC CGTTGCCCGA GCGCCTCGTC ATCGAGCTGA CCGCGCATCG CACCCTCGCT
CTGCGCAACG CGGTTGCGGA ACATCCCGAC GTCGCCATGA CCATGCTGCT GCACAAGCTG
GTCAGCGACA CCTTCCGGCG CACCGCACCG GCCGGCTGCC TCGAGGCCCG CGTCAATCAT
ATCTTCTTCT CGGCACAGTC CGAGGAGTTG AAGGACAGCA CGCCCGCGCG CGAGGTCGCC
GAGCGACACG AGCGCTGGGG CGATCACGTT CCCGACGACG ACCAGGCCCT GTGGGACTGG
CTCTCCCTGC TCGACCCCGG CACGCGCCTC GATCTGCTCG CCCATTGCGT CAGCTACGGC
GTGAACGCCC TGTTCGAGCG GCCCAATCCC TACAGCGGAT CGGGCGTCAG CCAGCATGGG
CTGGACGTGC GCCTCTCGCA GGCCGACCGC CTGGCGCGAG CCACCGGCCT CGACATGGTG
GCGGCGGGCT GGCGGCCGAC GGTCGGCAAC TATCTCGGCC GCGTCACCAA GCCCCGCATC
CTCGAAGCCG TGCGCGAAGG CGCGGGCGAG CGGGCCGCCC AACTCATCGA CCATCTGAAG
AAGGGTGACA TGGCCAAGGA GGCCGAGCGC CTGTTGGCCG ACACCGGCTG GCTGCCGGAG
CCACTGCGCC TAGTCGACCT CGATGATGGG CAGACCATCG AACCGGGCAC GGAGGCAGAC
GCCGGAGACG ATGCCGCCTT GCCGGACTTC CTCAGCGAGG ATCGCGACGA CGAGGAAGCC
GACGAGATCG AGGACGAAGA CGCCCTCACG ATCGCGGCCG AATGA
 
Protein sequence
MATAIQKITL SSARDIPFNK LVLSQSNVRR VKAGVSIEEL AESIARRGLI QSLHVRPVLD 
ADGAESGMFE VPAGGRRYRA LELLAKQKRL AKTVPVPCVV GDANSDILVD EVSLVENMER
APLHPLDQFR AFQAMRDKGM TEEAIAAAFF VGVNVVKQRL RLASVSPTLL EIYAEDGMTL
EQLMAFTVSS DHARQEQVWE AVKDSWQKEP YQIRRMLTET SVRASDKRAV FIGVEAYEAA
GGIVLRDLFQ SDDGGWLQDP ALLDSMVADK LKTTADEIAS EGWKWVEAAL SFPYGHQHGL
RELAGVTVDL TEEESATREA LRDEYDRLEA EYAEADELPD EIDARLGEIE QALDAFEQRP
TIYDPADIAV AGVFISLNAD GSLSVDRGYV RSEDERPVET EGSHAPEVDG EAGQQAAPAV
QRAVITIGGQ PAEPEDDEED GIKPLPERLV IELTAHRTLA LRNAVAEHPD VAMTMLLHKL
VSDTFRRTAP AGCLEARVNH IFFSAQSEEL KDSTPAREVA ERHERWGDHV PDDDQALWDW
LSLLDPGTRL DLLAHCVSYG VNALFERPNP YSGSGVSQHG LDVRLSQADR LARATGLDMV
AAGWRPTVGN YLGRVTKPRI LEAVREGAGE RAAQLIDHLK KGDMAKEAER LLADTGWLPE
PLRLVDLDDG QTIEPGTEAD AGDDAALPDF LSEDRDDEEA DEIEDEDALT IAAE