Gene Mpop_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3056 
Symbol 
ID6310962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3282942 
End bp3284738 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content58% 
IMG OID642651782 
ProductATP-dependent endonuclease family protein 
Protein accessionYP_001925746 
Protein GI188582301 
COG category[L] Replication, recombination and repair 
COG ID[COG3593] Predicted ATP-dependent endonuclease of the OLD family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGATAT TCTCGGTAGT GATCGAAAAT TTTCGCGGCA TCCAGTCGGC CAAACTGGTG 
CTGCCTGATC ACGCCGTACT GATCGGCGAC AACAATACCG GCAAATCGTC GGTATTCGAA
GCGATCGATC TCGCCTTGGG GCCGGACCGG CTGAGCCGGC GACCACCCGT GGATGAGCAT
GATTTCTATC AGGGGCGCTA TCTTCCTAGC CCAAACCCCG ATGCTCCCGA CGGCGCGGAG
CCCGGCCCCG CGCCGAAAAT CACGGTCGAG GTGACGATCA CCAATCTGTC ACCGGAGCAG
GAGGCACGAT TTGGAGCCAA CGTCGAGTGG CTGAATACTA CTACCGGAGA CTTCTATCAG
GAGGCCGACC CGGCCGGGGT CGATGCTGCC GAGATCAAGG CGGCGCTGCG CGTCACATTC
ATCGGCGAAT ACGATCCAGA TGAGGATGAC TTCGTCGGCA ACAGCTATTT CACGCGCAGT
CTCTCAGAGG ATGAGACACC TGCATCGTTC TCGAAGAAGG ACAAGCAGCA CTGCGGATTT
CTTTTCCTGC GGTCGTTGAG GACAGGATCT CGGGCGCTCA GCTTGGAACA TGGCAGCCTG
CTGGACATCA TCCTCCGGCT GAAGGAAATC CGGCCGCAGA TGTGGGAAGG GACGATCGGA
ACGCTTGCAG CCTACGATGT CGCGAGCGAC CCGGCCATTG GCATCTCGGG CGTGCTCGAG
AGCATCGACA AGTCGCTGAA GAAATACGTC CCGCGCGAAT GGGGAGTGAA GCCGCACCTT
AAGGTGTCGA ACCTGACACG CGAGCATTTG CGCAAGGTCA TCACCGCGTT CATCGCCACA
GGCGCGGGCG ATCATGCCGC TCCCTTCTTT CGGCAGGGAA CGGGGACGAT CAACATGCTG
GTGCTCGCGA TGCTGTCACA GATCGCCGAG GACAAGCAGA ATGTCATTTT TGCGATGGAG
GAAGCCGAAA CGGCTATTCC GCCATACGCG CAGAAGCGGA TCGTCCATGA GCTGCGTAAG
CTGTCGGCGC AGTCGCTCTT CACGTCGCAC TCGCCGTATG TGCTCGAAGA GTTTAGCCTC
CACGAAACGG TTATTCTGGC GCGCTCGGAT GACGGCCAAC TGAGCCAATC CAAAATCGAG
TTACCGGAGA GCATCAAACA CAAGCGCTAC CGGCAGGATT TCCGAACCCG GTTTTGCGAG
GGGCTCCTTT CGCGCCGTGT CCTCATCGCT GAAGGTGCGA CAGAGGCGGC CTCTTTCCCG
GTCGTCGCGC GGCGTTTGGC GGAGCTTAAC CCTGCCACCT ATGCGTCTTT GGAAGCCTTG
GGCGTGTGCG TAATCGACGC CGGAAGCGAG ACTCAGATCG CCGACCTTGG GGCTTTATAT
AAGAGCCTTG GGAAGCGGAC CTTTGCATTG TGCGACAAGC AGACAGATGC CGCCAAGGCT
GCCATTGAGG CCCAGGTGGA ACGCCTGTTC ATGCACGAAG AGAAGGGCAT TGAGGATCTG
ATCCTCAACA ACACCACGCA GGCTGCATTG GAGCGATTTG CCGATCAACT CGATTGGCCG
CAGCATCTCC TGAACCAGTA TCCGAATCCA AAAGCACAAG CGGCTGCCGC GCTTGGAGCT
TATTTCAAAT GGTCAAAAGG TAATTGGGGA ATAGCCGAGT TCTTGGCCCA GTGCTCCGAA
GTCGAAATCC CTCAGTGGCT GCGCGATGCC TGCACCACCT TGAAGGCAGC GTGTGACCCG
CCACCTCAAC CGGCCGAGGC CGATGGCGAA GATCTTTTTG CTGACATCTT GGGATAG
 
Protein sequence
MKIFSVVIEN FRGIQSAKLV LPDHAVLIGD NNTGKSSVFE AIDLALGPDR LSRRPPVDEH 
DFYQGRYLPS PNPDAPDGAE PGPAPKITVE VTITNLSPEQ EARFGANVEW LNTTTGDFYQ
EADPAGVDAA EIKAALRVTF IGEYDPDEDD FVGNSYFTRS LSEDETPASF SKKDKQHCGF
LFLRSLRTGS RALSLEHGSL LDIILRLKEI RPQMWEGTIG TLAAYDVASD PAIGISGVLE
SIDKSLKKYV PREWGVKPHL KVSNLTREHL RKVITAFIAT GAGDHAAPFF RQGTGTINML
VLAMLSQIAE DKQNVIFAME EAETAIPPYA QKRIVHELRK LSAQSLFTSH SPYVLEEFSL
HETVILARSD DGQLSQSKIE LPESIKHKRY RQDFRTRFCE GLLSRRVLIA EGATEAASFP
VVARRLAELN PATYASLEAL GVCVIDAGSE TQIADLGALY KSLGKRTFAL CDKQTDAAKA
AIEAQVERLF MHEEKGIEDL ILNNTTQAAL ERFADQLDWP QHLLNQYPNP KAQAAAALGA
YFKWSKGNWG IAEFLAQCSE VEIPQWLRDA CTTLKAACDP PPQPAEADGE DLFADILG