Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3056 |
Symbol | |
ID | 6310962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 3282942 |
End bp | 3284738 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642651782 |
Product | ATP-dependent endonuclease family protein |
Protein accession | YP_001925746 |
Protein GI | 188582301 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGATAT TCTCGGTAGT GATCGAAAAT TTTCGCGGCA TCCAGTCGGC CAAACTGGTG CTGCCTGATC ACGCCGTACT GATCGGCGAC AACAATACCG GCAAATCGTC GGTATTCGAA GCGATCGATC TCGCCTTGGG GCCGGACCGG CTGAGCCGGC GACCACCCGT GGATGAGCAT GATTTCTATC AGGGGCGCTA TCTTCCTAGC CCAAACCCCG ATGCTCCCGA CGGCGCGGAG CCCGGCCCCG CGCCGAAAAT CACGGTCGAG GTGACGATCA CCAATCTGTC ACCGGAGCAG GAGGCACGAT TTGGAGCCAA CGTCGAGTGG CTGAATACTA CTACCGGAGA CTTCTATCAG GAGGCCGACC CGGCCGGGGT CGATGCTGCC GAGATCAAGG CGGCGCTGCG CGTCACATTC ATCGGCGAAT ACGATCCAGA TGAGGATGAC TTCGTCGGCA ACAGCTATTT CACGCGCAGT CTCTCAGAGG ATGAGACACC TGCATCGTTC TCGAAGAAGG ACAAGCAGCA CTGCGGATTT CTTTTCCTGC GGTCGTTGAG GACAGGATCT CGGGCGCTCA GCTTGGAACA TGGCAGCCTG CTGGACATCA TCCTCCGGCT GAAGGAAATC CGGCCGCAGA TGTGGGAAGG GACGATCGGA ACGCTTGCAG CCTACGATGT CGCGAGCGAC CCGGCCATTG GCATCTCGGG CGTGCTCGAG AGCATCGACA AGTCGCTGAA GAAATACGTC CCGCGCGAAT GGGGAGTGAA GCCGCACCTT AAGGTGTCGA ACCTGACACG CGAGCATTTG CGCAAGGTCA TCACCGCGTT CATCGCCACA GGCGCGGGCG ATCATGCCGC TCCCTTCTTT CGGCAGGGAA CGGGGACGAT CAACATGCTG GTGCTCGCGA TGCTGTCACA GATCGCCGAG GACAAGCAGA ATGTCATTTT TGCGATGGAG GAAGCCGAAA CGGCTATTCC GCCATACGCG CAGAAGCGGA TCGTCCATGA GCTGCGTAAG CTGTCGGCGC AGTCGCTCTT CACGTCGCAC TCGCCGTATG TGCTCGAAGA GTTTAGCCTC CACGAAACGG TTATTCTGGC GCGCTCGGAT GACGGCCAAC TGAGCCAATC CAAAATCGAG TTACCGGAGA GCATCAAACA CAAGCGCTAC CGGCAGGATT TCCGAACCCG GTTTTGCGAG GGGCTCCTTT CGCGCCGTGT CCTCATCGCT GAAGGTGCGA CAGAGGCGGC CTCTTTCCCG GTCGTCGCGC GGCGTTTGGC GGAGCTTAAC CCTGCCACCT ATGCGTCTTT GGAAGCCTTG GGCGTGTGCG TAATCGACGC CGGAAGCGAG ACTCAGATCG CCGACCTTGG GGCTTTATAT AAGAGCCTTG GGAAGCGGAC CTTTGCATTG TGCGACAAGC AGACAGATGC CGCCAAGGCT GCCATTGAGG CCCAGGTGGA ACGCCTGTTC ATGCACGAAG AGAAGGGCAT TGAGGATCTG ATCCTCAACA ACACCACGCA GGCTGCATTG GAGCGATTTG CCGATCAACT CGATTGGCCG CAGCATCTCC TGAACCAGTA TCCGAATCCA AAAGCACAAG CGGCTGCCGC GCTTGGAGCT TATTTCAAAT GGTCAAAAGG TAATTGGGGA ATAGCCGAGT TCTTGGCCCA GTGCTCCGAA GTCGAAATCC CTCAGTGGCT GCGCGATGCC TGCACCACCT TGAAGGCAGC GTGTGACCCG CCACCTCAAC CGGCCGAGGC CGATGGCGAA GATCTTTTTG CTGACATCTT GGGATAG
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Protein sequence | MKIFSVVIEN FRGIQSAKLV LPDHAVLIGD NNTGKSSVFE AIDLALGPDR LSRRPPVDEH DFYQGRYLPS PNPDAPDGAE PGPAPKITVE VTITNLSPEQ EARFGANVEW LNTTTGDFYQ EADPAGVDAA EIKAALRVTF IGEYDPDEDD FVGNSYFTRS LSEDETPASF SKKDKQHCGF LFLRSLRTGS RALSLEHGSL LDIILRLKEI RPQMWEGTIG TLAAYDVASD PAIGISGVLE SIDKSLKKYV PREWGVKPHL KVSNLTREHL RKVITAFIAT GAGDHAAPFF RQGTGTINML VLAMLSQIAE DKQNVIFAME EAETAIPPYA QKRIVHELRK LSAQSLFTSH SPYVLEEFSL HETVILARSD DGQLSQSKIE LPESIKHKRY RQDFRTRFCE GLLSRRVLIA EGATEAASFP VVARRLAELN PATYASLEAL GVCVIDAGSE TQIADLGALY KSLGKRTFAL CDKQTDAAKA AIEAQVERLF MHEEKGIEDL ILNNTTQAAL ERFADQLDWP QHLLNQYPNP KAQAAAALGA YFKWSKGNWG IAEFLAQCSE VEIPQWLRDA CTTLKAACDP PPQPAEADGE DLFADILG
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