| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3043 |
|---|
| Symbol | |
|---|
| ID | 6310919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3270642 |
|---|
| End bp | 3271409 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642651769 |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_001925733 |
|---|
| Protein GI | 188582288 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAG ACGAGGAAGG GACGCTGTCG ATGAAGAAGG TCTATCCGGA TCCCGGAGCG
GCGCTGGCCG GGCTCCTGCG CGACGGCATG ACGATCATGG CCGGCGGCTT CGGCCTGTGC
GGCATCCCGG ATGAGCTGAT CGACGCGATC CAGGCCTCGG GCGTGAAGGA CCTGACCATC
GTCTCCAACA ATGCCGGCAT CGACGGCGTG GGCCTGGGCA AGCTGCTCGA CACCCGCCAA
GTCAAGAAGA TGATCTCGTC CTATGTCGGC GAGAACAAGG AATTCGCCCG CCAGTATCTC
GGCGGCGAGC TGGAGATCGA GTTCAACCCC CAAGGCACCC TGGCCGAGCG CATCCGCGCT
GGCGGCGCGG GCATCCCGGC CTTCTTCACC AAGACCGGCG TCGGCACCAA GGTCGCCGAG
GGCAAGGAGG TGCGCGAGTT CGACGGCGAG AGCTACGTGA TGGAGCGCGG GCTGTTCGCG
GATCTCGCCA TCGTCCACGC CTGGAAGGGC GATACCGAGG GCAACCTCGT CTACCGGAAG
ACGGCGCGCA ACTTCAATCC GATGATGGCC ACCGCCGCGG AGGTGACGGT CGCGCAGGTC
GAGAACCTCG TCCAGCCCGG CGAGATCGAC CCCGACCACA TCCACACGCC GGGCATCTTC
ATCGGCCGCA TCATCCATGT GCCGGTGCGT GAGAAGCGGA TCGAGCAGCG CACCGTGCGC
AAGCGCAAGG AGCCGGAAGC GGCCGCGGCC GGCGGCGGCC AGATCTGA
|
|---|
| Protein sequence | MAEDEEGTLS MKKVYPDPGA ALAGLLRDGM TIMAGGFGLC GIPDELIDAI QASGVKDLTI
VSNNAGIDGV GLGKLLDTRQ VKKMISSYVG ENKEFARQYL GGELEIEFNP QGTLAERIRA
GGAGIPAFFT KTGVGTKVAE GKEVREFDGE SYVMERGLFA DLAIVHAWKG DTEGNLVYRK
TARNFNPMMA TAAEVTVAQV ENLVQPGEID PDHIHTPGIF IGRIIHVPVR EKRIEQRTVR
KRKEPEAAAA GGGQI
|
|---|
| |