| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3022 |
|---|
| Symbol | |
|---|
| ID | 6310888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3251215 |
|---|
| End bp | 3251688 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642651748 |
|---|
| Product | transcriptional regulator, TrmB |
|---|
| Protein accession | YP_001925712 |
|---|
| Protein GI | 188582267 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.195041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGC GTCAAGCCCG CCCCGCTTCG AACGCCGAGG CCGTCGATCC GCTGCGGGTC
TGGTTTCGGT TCATCCGCCT TAGCCGGCGC GTCACCGCCG CGGTGGCCGC TGAACTGCGG
GACCTCGGCC TGTCGATTCC GCAGTTCGAT GTGCTGTCGA CGTTGAGTGA GCGCGAGGGA
CTGACACAGC AGGAACTCGC CGCCCGGCTC TACGTGACGA AGGGCAATGT TTCGGGGCTG
ATCGACCGGC TCGTCGATGC CGGACTGGTC GAGCGCCGGC CGATCCCCGG CGATCGCCGC
TCCCACGCGC TCCATCTGAC ACCGGCCGGG GCAGCGGTCG CCGAGCGTGG CATCGCGGCG
CAGGCCGCCT ATGTCGCGCG GACCTTGGGC CGTCTCGATG AGGCCGAACT GGAGACGTTC
GAGGAACTCG TCGTCAAATG GCGCGAACTG GCCCGCACCG ACGCGTCAAG CTGA
|
|---|
| Protein sequence | MSERQARPAS NAEAVDPLRV WFRFIRLSRR VTAAVAAELR DLGLSIPQFD VLSTLSEREG
LTQQELAARL YVTKGNVSGL IDRLVDAGLV ERRPIPGDRR SHALHLTPAG AAVAERGIAA
QAAYVARTLG RLDEAELETF EELVVKWREL ARTDASS
|
|---|
| |