| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3014 |
|---|
| Symbol | |
|---|
| ID | 6310810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3244864 |
|---|
| End bp | 3247530 |
|---|
| Gene Length | 2667 bp |
|---|
| Protein Length | 888 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642651740 |
|---|
| Product | pyruvate phosphate dikinase |
|---|
| Protein accession | YP_001925704 |
|---|
| Protein GI | 188582259 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAT GGGTCTATTC CTTCGGTGAC GGCAAGGCCG AGGGCGAGGC GTCGATGCGC
AACCTCCTCG GCGGCAAGGG GGCCAACCTC GCCGAGATGT CGAACCTCGG CCTTCCGGTG
CCCCCCGGCT TCACCATCAC CACGGAAGTC TGCACCTACT ATTACGAGCA CGGCGAGACC
TATCCGGCGG AGCTGAAGGA CGCTGTGAAC GCGGCGCTCG ACACCGTCGG AGGGCTCACC
GGCCGCCGCT TCGGCGATGC CGACAAGCCG CTGCTCGTCT CGGTCCGCTC CGGTGCCCGC
GCCTCCATGC CGGGCATGAT GGACACGGTG CTCAACCTCG GCCTGAACGA CACCACCGTC
GAGGCCCTGG CCAAGGACGC CGACGACGAG CGCTTCGCCT ACGATTCCTA CCGCCGCTTC
ATCACGATGT ACTCGAACGT CGTGCTCGGC GTGGAGCACC ATGCCTTCGA GGAGGCGCTG
GAGCACTACA AGGAAGAGAA GGGCCTCAAC CTCGACACCG AGCTGAAGGC CGACGACTGG
AAGCACCTCA TCGGCGTCTA CAAGAAGATC GTCCGCGACG AGCACGGCTC GGACTTCCCG
CAGAAGCCCG AGGACCAGCT CTGGGGCGCG ATCGGCGCCG TGTTCGATTC GTGGATGATC
CCGCGGGCCA AGAAGTACCG CGAGCTGAAC AACATCCCCG AGAGCTGGGG CACGGCCGTC
AACGTCCAGG CCATGGTGTT CGGCAATATG GGCGACACCT CGGCCACCGG CGTCGCCTTC
ACCCGCAACC CCTCCACCGG CGAGAGCGCG CTCTACGGCG AGTTCCTCAT CAACGCCCAG
GGCGAAGACG TGGTGGCGGG CATCCGCACG CCGCAGGACA TCACCGAAAA GGCCCGCATT
GAGGCGAAGT CCGACAAGCC GTCGATGGAA AAGGCGATGC CCGAGAGCTT CGCCGAGCTG
ACGCGGATCT ATGGGATCCT CGAGAAGCAC TACCGCGACA TGCAGGACAT GGAGTTCACC
ATCGAGCGCG GGAAGCTCTG GATGCTCCAG ACCCGCAACG GCAAGCGCAC CGCCAAGGCG
GCCCTGCGCA TCGCCGTCGA ACTCGCGGGC GAGGGCCTGA TCTCCAAGGA AGAGGCGGTC
AAGCGCATCG AGCCGGGCGC GCTCGACCAG CTCCTGCATC CGACCATCGA CCCGGATGCC
GAGCGCAAGG TGATCGCCAG CGGCCTGCCG GCCTCGCCGG GCGCGGCGGT GGGCGAGATC
GTGTTCAACT CGGAAGCGGC GGAAGCCGCC AAGAAGGCCG AGCGCCGCTG CATCCTCGTG
CGCATCGAGA CCTCGCCGGA GGACATCCAC GGCATGCACG CCGCCGAGGG CATCCTCACC
ACCCGCGGCG GCATGACCAG CCACGCGGCG GTGGTCGCCC GCGGCATGGG CAAGCCCTGC
GTCTCCGGCG TCGGCTCGAT CCGGATCGAC TACAAGGCGC AGACGCTCAC CGTCGGTGGC
GTGACCCTGA AGGCCGGCGA CGTCATCACC ATCGACGGCT CGACCGGACA GGTGATCCAG
GGCGAGGTCA AGATGCTCCA GCCGGAGCTG TCGGGCGACT TCGCCGCGCT GATGGAATGG
GCGGATGCGG TGCGCACCAT GAAGGTGCGC ACCAACGCCG ACACCCCGGC CGATGCCCGC
GCCGCCCGCA AGTTCGGTGC GGAAGGCATC GGCTTGTGCC GCACCGAGCA CATGTTCTTC
GAGGGTGACC GGATCGTCGC GGTGCGCGAG ATGATCCTCT CGGACGACGC CGAGGGCCGC
CGCAACGCGC TGGCGAAGAT CCTGCCCTAT CAGCGTCAGG ACTTCGTCGA GCTGTTCACG
ATCATGTCGG GCCTGCCCGT CACGATCCGC CTGCTCGATC CGCCGCTGCA CGAGTTCCTG
CCGCACACGG ACGAGGAGAT CCGCGAGGTC CAATCGGCCA CCGGCATCCC GGAGGATAAG
ATCCGCAACC GCATCCGCGA ACTCTCCGAG CACAACCCGA TGCTCGGCTT CCGCGGCTGC
CGGCTGGCCA TCGCCTTCCC CGAGATCGCC GAGATGCAGG CCCGCGCGAT CTTCGAGGCG
GCGGTGCAGG CGGCCAAGGA TACCGGCGCA CCGGTAACCC CGGAGGTGAT GGTGCCTCTG
GTGTTCACGC GGATGGAGTT CGACATCGTC AAGGCCCGCA TCGACGCCAT GGCCAAGGCC
GTGACGGAGG AGACCGGCGC CAAGCTCGAA TATCAGGTCG GCACGATGAT CGAGCTGCCG
CGCGCGGCGC TCAAGGCCGG CGAGATCGCC GAGACCGCGG AGTTTTTCTC CTTCGGCACC
AACGATCTCA CCCAGACGGC GCTCGGCATC TCGCGCGACG ACGCGGCCAC CTTCCTCGGG
CCCTACACCC AGAAGGGCAT CCTTTCGGTC GATCCGTTCG TGTCGATCGA TCAGGAGGGC
GTGGGCGAGC TGGTGAAGAT CGGCGCCGAG CGCGGCCGTG CGACCCGCGA CGGGCTCAAG
CTCGGCATCT GCGGCGAGCA CGGCGGCGAC CCGGCCTCGA TCGGCTTCTG CCAGGAAGTC
GGCCTCGACT ACGTCTCCTG CTCGCCCTTC CGTGTGCCTA TCGCCCGCCT CGCCGCGGCG
CAGGCGGCGC TCGGCAAGGA CGCCTGA
|
|---|
| Protein sequence | MTKWVYSFGD GKAEGEASMR NLLGGKGANL AEMSNLGLPV PPGFTITTEV CTYYYEHGET
YPAELKDAVN AALDTVGGLT GRRFGDADKP LLVSVRSGAR ASMPGMMDTV LNLGLNDTTV
EALAKDADDE RFAYDSYRRF ITMYSNVVLG VEHHAFEEAL EHYKEEKGLN LDTELKADDW
KHLIGVYKKI VRDEHGSDFP QKPEDQLWGA IGAVFDSWMI PRAKKYRELN NIPESWGTAV
NVQAMVFGNM GDTSATGVAF TRNPSTGESA LYGEFLINAQ GEDVVAGIRT PQDITEKARI
EAKSDKPSME KAMPESFAEL TRIYGILEKH YRDMQDMEFT IERGKLWMLQ TRNGKRTAKA
ALRIAVELAG EGLISKEEAV KRIEPGALDQ LLHPTIDPDA ERKVIASGLP ASPGAAVGEI
VFNSEAAEAA KKAERRCILV RIETSPEDIH GMHAAEGILT TRGGMTSHAA VVARGMGKPC
VSGVGSIRID YKAQTLTVGG VTLKAGDVIT IDGSTGQVIQ GEVKMLQPEL SGDFAALMEW
ADAVRTMKVR TNADTPADAR AARKFGAEGI GLCRTEHMFF EGDRIVAVRE MILSDDAEGR
RNALAKILPY QRQDFVELFT IMSGLPVTIR LLDPPLHEFL PHTDEEIREV QSATGIPEDK
IRNRIRELSE HNPMLGFRGC RLAIAFPEIA EMQARAIFEA AVQAAKDTGA PVTPEVMVPL
VFTRMEFDIV KARIDAMAKA VTEETGAKLE YQVGTMIELP RAALKAGEIA ETAEFFSFGT
NDLTQTALGI SRDDAATFLG PYTQKGILSV DPFVSIDQEG VGELVKIGAE RGRATRDGLK
LGICGEHGGD PASIGFCQEV GLDYVSCSPF RVPIARLAAA QAALGKDA
|
|---|
| |