Gene Mpop_2957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2957 
Symbol 
ID6310675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3186384 
End bp3188660 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content74% 
IMG OID642651683 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_001925647 
Protein GI188582202 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCC GCCAGCAGCT TCTCGCCGCC TTCGAGATCG AGCACCGCGA GCACCTCGAC 
GCGATCCGCG CCGCCCTCGC GGCCGAGGGG CCGGTCGATT GGCACGACGT GTTCCGCCGG
GCCCACAGCC TGAAGGGGGC GGCGCGCGCC GTCGACCTGC CCCCGGTGGA GGCGGTCTCG
CACCAGCTCG AAACCCTGTT CGAACGCATC AGCACCGGAC AGCGACCCCT CGACCGGGAG
GCGCGGGCCG CGACCCATCT CGCCCTCGAC CGGATCGAGG CCTTCGTCGC GGCGAGCGCC
GCGGGCGGGG CGGTGATGCC GGAGGACGCG CTGGCGGCGC TCGCGGCCTG CCTCGATCCG
GACGCCGCGG CGCCGGCTCC CGCCGAGCCC GCTCCCACGG CGGCCCCCAC GGTCGCGGCC
CCAGCCACGA CGCCGGCCGC CGCGCCGGCT GCTGCCCCAG TTGCCACCCC GGAATCGGCG
GCCGAGCCCG CCCAGGCGGT GCTGCGGGTT CCGGCCTCGG CCGTCGAATC GCTGTCGCGG
GCCAGTCACG GCCTCTGGGC AGCCTTGCCG GGCCAGACCG CCACCGCCGA GCGCATCGCC
CGGCTGTCGG CCCATGCGGG CGAGCTGCGC CGCCGCTCGG AAGCCGCCCG CCGCGCCCCC
GTCGCAGGCC CCGCCTACGG GGCGGCGACG GAGACGGAGA GCGAGACGGC GGCGCTACGG
CGGACGCTGG CCGAGATCGA GACCGGACTC GCCGCCCTGG CGCGCGAGGC GTCCGATCTC
GCTCAAGGCC ACAAGGCCGC GGTTCTCTCG GTGGAGACCG CCGCCCGCCG CCTGCGGGAG
GAGACCGAGC GCCTCGCCCT CGTTCCCGCC GAGACGGTGT TCGGCGGCCT CGCCCGCGCG
GTGCGCGACA TGGCTCGCAC AGACGGCCGG GAGGTCGAGG TCACGACCCG CGGGCTCGAC
CTGCCGGTGG ACCGGGCGAT GCTCCAGGCC CTCAAGGATC CGGTGCTGCA CGCCCTTCGC
AACGCGTTGA GCCACGGTGC GGACTCTCCC GAGTCCCGCC AGCGGCAGGG GAAGCCGGCC
GCTCTGACGA TCGGACTTAC CGTCGAGGCG CAGGGCGGGC GGCTCGTCCT CGGCATCCAC
GACGACGGAC GCGGTCCCGA CCTCGCCGCC ATCGAGGCGA CGGGCCGTGC CCGTGGCCTG
ATCGCGCCGG GCGAGAGTCT CGACGCGGAC GCCCTCCTCG CCCTGCCGTT CGAGCCGGGT
TTCTCCACCG CGGGCGCGGT CGATGCCCTG TCGGGACGGG GCATGGGCCT GTCGGTGGTG
GCCGAGGTTG CCCGCTCCCT GCACGGGCAG GTGCAGCTCG CCCGCCGTCA TCCGCACGGC
ACCTCGCTGA TCCTGACGCT CCCCCTCTCG GCGGCGCGGC GGCCGGTGCT GATCGTCGCG
GCCGGGGGTA CCCGCTACGC CCTGCCGAGC GGGGCGGCGG AAGCGCTCTC GCGGCTCGAA
CCCGGGGCTT TGTCCACGGT CGGAGGCCGC CCGGTGGCGC AGGTGGCGGG AGAGGACGGC
GAGACCGTCA CGCTGCCCGT GGCCGAACTC GGCGACCTGC TCGGGATCGG ATCCGGCCGT
CCGGACGGCG CGACCATTCC GGTGGTGCGC CTGCGCGGCA CCCGCGGGCG CTGCCTGCTC
GCGGTCGAGC GTCTGGAGGA GGTACGCACG CTGCTCGTCT TGCCCGCGCC GCCGATCGGC
AGCGATCCGG CCCTGATCAC CGGAACCGTG ATTCTCGGCA CCGACACGCC CGTCCTCGTC
CTCGACCCCG ACGGGCTCAT CGACCGGCTC GGCCGCGCCG GTCCGCGGGC CCTGCGGTCT
CCGTCGAAAG CAGGGGAGGA CGGCGGCGGA ACGATCCCGG AAAAGCGACG TTCGACGATT
CTTGTCGTGG ACGACTCGAT CACGACCCGC ACTCTGGAGA AGAGCATCTT GGAAGCGGCG
GGCTACCGCG TGATCGTCTG CGTCGATGGG CAGGAGGCGC TCGGCCGCCT TCGGGCGCGC
ATCGAGCCGG TCGATCTCGT CGTCGCAGAC GTCGAGATGC CGCGGCTGAC CGGCTTCGGC
CTCGTCGAGG CGTTGCGGGC CGAAGAGGAT TTCGCGCGCC TTCCGATCGT GCTGATGACC
TCGCGGGGCG ACGAGGAGGA CGTGGCGAAG GGCTTGGAAC TCGGCGCCGA TGCTTATCTC
ACCAAGCAGA AATTCGATCA GCGCGAACTC CTGGATACCA TCGGTCAGTT GCTGTGA
 
Protein sequence
MDIRQQLLAA FEIEHREHLD AIRAALAAEG PVDWHDVFRR AHSLKGAARA VDLPPVEAVS 
HQLETLFERI STGQRPLDRE ARAATHLALD RIEAFVAASA AGGAVMPEDA LAALAACLDP
DAAAPAPAEP APTAAPTVAA PATTPAAAPA AAPVATPESA AEPAQAVLRV PASAVESLSR
ASHGLWAALP GQTATAERIA RLSAHAGELR RRSEAARRAP VAGPAYGAAT ETESETAALR
RTLAEIETGL AALAREASDL AQGHKAAVLS VETAARRLRE ETERLALVPA ETVFGGLARA
VRDMARTDGR EVEVTTRGLD LPVDRAMLQA LKDPVLHALR NALSHGADSP ESRQRQGKPA
ALTIGLTVEA QGGRLVLGIH DDGRGPDLAA IEATGRARGL IAPGESLDAD ALLALPFEPG
FSTAGAVDAL SGRGMGLSVV AEVARSLHGQ VQLARRHPHG TSLILTLPLS AARRPVLIVA
AGGTRYALPS GAAEALSRLE PGALSTVGGR PVAQVAGEDG ETVTLPVAEL GDLLGIGSGR
PDGATIPVVR LRGTRGRCLL AVERLEEVRT LLVLPAPPIG SDPALITGTV ILGTDTPVLV
LDPDGLIDRL GRAGPRALRS PSKAGEDGGG TIPEKRRSTI LVVDDSITTR TLEKSILEAA
GYRVIVCVDG QEALGRLRAR IEPVDLVVAD VEMPRLTGFG LVEALRAEED FARLPIVLMT
SRGDEEDVAK GLELGADAYL TKQKFDQREL LDTIGQLL