| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2937 |
|---|
| Symbol | |
|---|
| ID | 6310499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3160461 |
|---|
| End bp | 3161606 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642651663 |
|---|
| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
|---|
| Protein accession | YP_001925627 |
|---|
| Protein GI | 188582182 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0320992 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATT CCCTTCATCC GGCCGACGAC CCGAATCCGG CCTCCCTGCC GGCGGCCGAA
GCGGTGCTGA ACGCCCTGCC GCTGCCGGTG CTCACCATCG GTCCGGACGA GCGCATCCTG
CGGGTCAACC ACGCCGCCGA GCTGTTCTTC GATGCCTCCG CCCGGCTGAT GCTGCGGGGG
CGGCTTCGCG ACATCATCCC CTTCTCCTCG CCGATCATCG CGCTGGTGGC CGAGGTTCGC
CGCCGCCGCT CCAGCGTCTC GGAATACCGG GTCGAGCTGG TCCAGCCCCG CTCGGGCACC
GAGCGCAGCG TCGACGTCTT CGCCACGCCG CTTCGCGACG AGGACGACTC GGTGGTGCTG
ATGCTCCAGG AGCGCACCAT CGCCGACAAG ATGAACCGGC AGCTCACCCA TCGCGGGGCC
GCCCGCTCGA TGATCGCCCT CGGCGCGATG CTCGCCCACG AGATCAAGAA CCCGCTCGCC
GGCATCCGCG GCGCCGCGCA GCTGCTCGAA CAGGAGCGCG ACGACGAGGA CCGGCTCCTC
ACGCGGCTGA TCTGCGATGA ATCGGATCGG ATCGTGCGCA TCGTCGAGCG GATGGAGCTG
TTCGGCGACG AGCGGCCGGT CGAGCGCGGC CCCGTCAACG TCCACGGCGT GCTCGATCAG
GTGAAGCGCT CGGCGCAATC CGGCTTTGCC CGTCACATCC GCTTCATCGA GAACTACGAC
CCCTCGCTGC CGCCCGTCCT CGGCAACCGG GACCAGTTGA TCCAGGTGAT CCTGAACCTC
GTGAAGAATG CCGCGGAGGC GATCGGCACG GACACGGTGG AGGGCGAGAT CACGCTCTCG
ACCGCCTTCC GCACCGGCCT GCGCCTTCAG ATCCCCGGCT CGCGCGAGCG CGTCAGCCTG
CCCATCGAGG TGGCGGTGCG CGACAACGGG CCTGGCATTC CGCCCGACAT GCTGTCCGAC
CTGTTCGATC CCTTCGTGAC CACCAAGGCG CAGGGATCCG GCCTCGGACT TGCATTGGTG
GCCAAGATCG TCGGCGATCA TGGGGGCATC GTCGAATGCG ATCCCGTTCC CCGCCGCACC
GCCTTCCGGA TCCTGCTGCC TATGTCGAGC GCCCGTGATG GGCGTGAATC GGCTGCGGAG
CGTTGA
|
|---|
| Protein sequence | MPDSLHPADD PNPASLPAAE AVLNALPLPV LTIGPDERIL RVNHAAELFF DASARLMLRG
RLRDIIPFSS PIIALVAEVR RRRSSVSEYR VELVQPRSGT ERSVDVFATP LRDEDDSVVL
MLQERTIADK MNRQLTHRGA ARSMIALGAM LAHEIKNPLA GIRGAAQLLE QERDDEDRLL
TRLICDESDR IVRIVERMEL FGDERPVERG PVNVHGVLDQ VKRSAQSGFA RHIRFIENYD
PSLPPVLGNR DQLIQVILNL VKNAAEAIGT DTVEGEITLS TAFRTGLRLQ IPGSRERVSL
PIEVAVRDNG PGIPPDMLSD LFDPFVTTKA QGSGLGLALV AKIVGDHGGI VECDPVPRRT
AFRILLPMSS ARDGRESAAE R
|
|---|
| |