| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2912 |
|---|
| Symbol | |
|---|
| ID | 6310324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3137440 |
|---|
| End bp | 3138852 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642651638 |
|---|
| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
|---|
| Protein accession | YP_001925602 |
|---|
| Protein GI | 188582157 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0650782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCA ACGTCCTGAT GCCCGCGCTC TCCCCGACCA TGGAGAAGGG CAACCTCGCC
AAGTGGCTCA AGAAGGAGGG CGACGCCATC AAGTCCGGCG ACGTGATCGC CGAGATCGAG
ACCGACAAGG CGACAATGGA GGTCGAGGCG GTCGATGAGG GTGTTCTCGC CAAGATCCTC
GTGGCCGAAG GCACGGCCGA CGTGCCGGTC AACGAGCTGA TCGCGCTGAT CGCCGAGGAG
GGCGAGGATC CGGGCAGCGT CGAGGCGCCG AAGGGCGGCG AGGCCAAGGG CGAGGCGAAG
ACCGCGCCGG TCGAGCCGAA GGGCACCCCC GATCAGAACG CCGCGCCCGA TGGTGCGCAC
GCCTCCTACG CCCGGGTCGA TCAGGCCCCC GAGGGTGCCA AGCCTAACGG CGCCGCGCAG
CCCGGAGCCT CCGGCGGCCG GGTCTTCGCC TCGCCGCTGG CGCGCCGCAT CGCCAAGCAG
GAGGGTATCG ATCTCTCGGC GGTGAAGGGC TCCGGTCCGC ATGGCCGCGT GATCCAGCGC
GACGTGCAGG CGGCGATCGA GGGCGGCACG GCCAAGGCCG GCGCCGCGGC CAAGCCAGAG
ACGAAGGCTC CCACACCGGC GGCGGACAAG CCTGCTCCCA AGGCAGCCCC CACCGGTGGA
GCGCCGGCCG GGCTCAGCCT CGATCAAGTG AAGGGCTTCT ACGAAAAGGG CAGCTTCGAG
GAAGTGCCGC TCGACGGCAT GCGCAAGACC ATTGCCAAGC GCCTCACGGA GGCGATGCAG
GTCGCGCCGC ACTTCTACCT CACCGTCGAC TGCGAACTCG ACGCGCTGAT GAAGCTGCGC
GAGACGCTCA ACGGCTCGGC CGGCAAGGAC AAGGACGGCA AGCCGCTGTT CAAACTCTCG
GTGAACGACT TCGTCATCAA GGCGATGGGC CTCGCGCTCA CCCGCGTGCC CGCCGCCAAC
GCCGTCTGGG CCGAGGATCG CATCCTGCGC TTCAAGCATG CCGAAGTCGG CGTCGCGGTC
GCGATCGACG GCGGCCTGTT CACTCCGGTG ATCCGTAAGG CCGATCAGAA GACGCTCTCC
ACCATCTCCA ATGAGATGAA GGACTTTGCG GGCCGGGCGC GCGCCAAGAA GCTGAAGCCG
GAAGAGTACC AGGGCGGCGT CACCTCGGTG TCGAACCTCG GCATGTTCGG CATCAAGCAC
TTCACCGCGG TGATCAACCC GCCGCAATCG ACGATCCTTG CTGTCGGCGC CGGAGAAAAG
CGCGTCGTCG TCAAGGACGG CGCTCCGGCG GTGGTGCAGG CCATGACCGC AACGCTTTCC
TGCGATCACC GCGTCCTCGA CGGTGCCCTC GGCGCCGAGC TGATCGCGGC CTTCAAGGGC
CTGATCGAGA ACCCGATGGG GATGCTGGTC TGA
|
|---|
| Protein sequence | MPINVLMPAL SPTMEKGNLA KWLKKEGDAI KSGDVIAEIE TDKATMEVEA VDEGVLAKIL
VAEGTADVPV NELIALIAEE GEDPGSVEAP KGGEAKGEAK TAPVEPKGTP DQNAAPDGAH
ASYARVDQAP EGAKPNGAAQ PGASGGRVFA SPLARRIAKQ EGIDLSAVKG SGPHGRVIQR
DVQAAIEGGT AKAGAAAKPE TKAPTPAADK PAPKAAPTGG APAGLSLDQV KGFYEKGSFE
EVPLDGMRKT IAKRLTEAMQ VAPHFYLTVD CELDALMKLR ETLNGSAGKD KDGKPLFKLS
VNDFVIKAMG LALTRVPAAN AVWAEDRILR FKHAEVGVAV AIDGGLFTPV IRKADQKTLS
TISNEMKDFA GRARAKKLKP EEYQGGVTSV SNLGMFGIKH FTAVINPPQS TILAVGAGEK
RVVVKDGAPA VVQAMTATLS CDHRVLDGAL GAELIAAFKG LIENPMGMLV
|
|---|
| |