| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2851 |
|---|
| Symbol | |
|---|
| ID | 6310383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3068701 |
|---|
| End bp | 3069639 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642651575 |
|---|
| Product | chlorophyll synthesis pathway, BchC |
|---|
| Protein accession | YP_001925541 |
|---|
| Protein GI | 188582096 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.754242 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCAT TGGCCGTCGT CCTTGAGCGA CCAGAGCGTT TGGCGCTGAG CCGCCTCGCT
CTGACCCCCG CCGCCGAGGG CGATGCGGTC GTCGCCGTCT CCTGGAGCGG GATCAGCACG
GGCACCGAGC GCCTGCTCTG GTCCGGCCGG ATGCCGCCCT TTCCCGGAAT GGGCTACCCG
CTCGTGCCCG GCTACGAGTC GGTCGGCACC GTGGTCGAGG CCGCCTCCGG CAGCGGCCTG
AAGATCGGCC AGACCGTGTT CGTTCCCGGC GCCCGTTGCT TCGGCGAGGT CAACGGACTG
TTCGGCGGCG CGGCTTCGCA CCTCATCGCC CCGGCCGCGC GGCTCGTCCC GGTCGATGCC
GCGCTCGGCG ACCGTGCCTG CTTGATCGCG CTCGCGGCGA CCGCCTACCA TGCCCTGTCC
GGCATCGTGC CCGGCGAGCG CAACCTGATC GTCGGCCACG GCGTGCTCGG CCGGCTGCTC
GCGCGGCTGA CGCGGATCGC GGGCGGCGAA CCGGTGGTGT GGGAGCGCGA GCCGGTCCGC
GCCGCGGGCG ATTACGGCTA CCCCGTGCTC GCGCCCGAGG ACGATCCGAC GCGCGACTAT
CCGGTCATCA CCGACGTCAG CGGCGATTCG GGCCTGCTCG ACACGCTGAT CGGCCGCCTC
GCCCCCGGCG GCGAGATCGT GCTTGCCGGC TTCTACGAGG CGCCGCTCGC CTTCGCCTTT
CCACCCGCCT TCATGCGCGA GGCCCGCATC CGGGTCTCGG CGGAGTGGCG GCCGGGCGAT
CTCGCGGCGG TCCGCGCGCT GATCGAGACG GGACGTCTCT CGCTCGACGG GCTGATCACC
CACCGTCGGC CGGCGACGCA GGCGGAGGGC GCCTACCGCA CGGCCTTCGC CGATCCCTCC
TGCCTGAAGA TGATCCTCGA TTGGAGGACC TGCTCATGA
|
|---|
| Protein sequence | MEALAVVLER PERLALSRLA LTPAAEGDAV VAVSWSGIST GTERLLWSGR MPPFPGMGYP
LVPGYESVGT VVEAASGSGL KIGQTVFVPG ARCFGEVNGL FGGAASHLIA PAARLVPVDA
ALGDRACLIA LAATAYHALS GIVPGERNLI VGHGVLGRLL ARLTRIAGGE PVVWEREPVR
AAGDYGYPVL APEDDPTRDY PVITDVSGDS GLLDTLIGRL APGGEIVLAG FYEAPLAFAF
PPAFMREARI RVSAEWRPGD LAAVRALIET GRLSLDGLIT HRRPATQAEG AYRTAFADPS
CLKMILDWRT CS
|
|---|
| |