| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2845 |
|---|
| Symbol | |
|---|
| ID | 6310253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3061810 |
|---|
| End bp | 3063291 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642651569 |
|---|
| Product | signal recognition particle-docking protein FtsY |
|---|
| Protein accession | YP_001925535 |
|---|
| Protein GI | 188582090 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0552] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.634202 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG ACGAGAAGCC CGGCTGGTTC GGACGCCTGT TCGGGCGGAA GGGCGCGCCG
GAGGCCAAGC CTGCCGAGCC GACCCCCGCT GACCAGACTG CGCCCGAGGA CCCGCCGGCG
CCGGAGCCGT TCGCGACGGA AGCGGTCACG CCGGATCCGC TGTCGCCGGC CTCCGAATCC
GAGGGCCAGC CGGATTTCGC CACGGCCGCC GACGACGTGT CCCACGTGCC GCCGCCGGTC
AGCGAGCCCG CACCGGACGA TCCGGACAAG AATCAGATCC CTGACGAGCT GGAGGGTGCC
GACCTTCAGC CCGAGCCGCA GCCGCCGTCG GGCGAGGCGC CGCAGCCGGA CGAGGCGCCG
GACGGGAGCG AGACCCTGGC CGTCACCGCC GAACCGGTGG AGAAGCGGAA CTGGTGGTCG
CGCCTCACCG GCAGCGAGAT GGAGGTCGCC GCGCCCGCGA CCGAAGCGGA ACCGCCCGCG
GAAGCCGACA TCCAGCCCGT CGATGCCGCC GCTGCGCTCG CGAGCGACGC GATCGCGGGT
GCCGTGGAGG GCACGGAGAA GCAGGGCTGG TGGTCGCGGC TCACGGCGGG CATGCGGCGC
ACCTCGTCGG CCCTGTCGGA TCGGGTGACA GGCCTGTTCA CGAAGCGCAA GCTCGATGCC
ACGACCCTGG AGGATCTCGA GGACGCGCTA ATCCAAGCCG ATTTCGGCGT CGAGACGGCG
ATGCGGATGT CGGAGGCGGT CGGCAAGGGC CGCTACGAGA AGGGCATCTC GCCCGATGAG
GTGCGCGCCA TCCTCGCCAC CGAGATCGAG CGGGCGTTGG AGCCGGTGGC GACGCCGATC
GCGATCGATT CGGCCAAGAA GCCCTACGTG ATCCTGACGG TCGGCGTGAA CGGCGCCGGC
AAGACGACGA CGATCGGCAA GCTTTCGTTG AAGTTCAAGG CGGAGGGCCG CAGCGTCATG
CTGGCGGCGG GCGACACGTT CCGCGCGGCG GCGATCGAGC AGTTGCGCGT CTGGGGCGAG
CGCACCGGCA CGCCGGTCAT CAGCCGCGCG CAAGGATCGG ACGCGGCAGG GCTCGCCTTC
GACGCCTTTA AGGAGGCGCG GGAGAACGGC ACCGACGTGC TGCTGATCGA CACCGCCGGC
CGCCTGCAGA ACAAGGCTGG GCTGATGGCG GAGCTGGAAA AGATCGTCCG CGTCATCCGC
AAGCTCGACC CGGAGGCGCC CCATGCCACC CTGCTCGTGC TCGACGCCAC CGTCGGTCAG
AACGCCCTGA GCCAAGTCGA GCTGTTCTCG CAGGCCGCCC CCGTCTCCGG CCTCGTGATG
ACGAAGCTCG ACGGGACCGC GCGCGGCGGT ATTCTGGTGG CACTCGCCGC GAAGTTCGGT
CTGCCCGTGC ATTTCATCGG CGTCGGCGAG GGCGTGGAAG ACCTGGAGCC GTTCGCCGCG
CGGGATTTCG CCCGGGCGAT CACCGGCCTT CCCAAGGAGT AG
|
|---|
| Protein sequence | MSDDEKPGWF GRLFGRKGAP EAKPAEPTPA DQTAPEDPPA PEPFATEAVT PDPLSPASES
EGQPDFATAA DDVSHVPPPV SEPAPDDPDK NQIPDELEGA DLQPEPQPPS GEAPQPDEAP
DGSETLAVTA EPVEKRNWWS RLTGSEMEVA APATEAEPPA EADIQPVDAA AALASDAIAG
AVEGTEKQGW WSRLTAGMRR TSSALSDRVT GLFTKRKLDA TTLEDLEDAL IQADFGVETA
MRMSEAVGKG RYEKGISPDE VRAILATEIE RALEPVATPI AIDSAKKPYV ILTVGVNGAG
KTTTIGKLSL KFKAEGRSVM LAAGDTFRAA AIEQLRVWGE RTGTPVISRA QGSDAAGLAF
DAFKEARENG TDVLLIDTAG RLQNKAGLMA ELEKIVRVIR KLDPEAPHAT LLVLDATVGQ
NALSQVELFS QAAPVSGLVM TKLDGTARGG ILVALAAKFG LPVHFIGVGE GVEDLEPFAA
RDFARAITGL PKE
|
|---|
| |