| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2627 |
|---|
| Symbol | |
|---|
| ID | 6312993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 2859241 |
|---|
| End bp | 2859969 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642651351 |
|---|
| Product | Helix-turn-helix type 11 domain protein |
|---|
| Protein accession | YP_001925319 |
|---|
| Protein GI | 188581874 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGGA CCGATCGGCT TTTCCGGTTG CTGCACGCGA TGCGCATCCT GCCCTCCCCA
GTCACCGCCG CGCGGCTCGC GGAGGAGACC GGGGTGTCGC TGCGCTCGCT CTACCGCGAC
ATCGACAGCC TGCGCGCGGC GGGCGCCCGC ATCGAGGGCG AACGGGGCTA CGGCTACCGG
CTGATCGAAG ACGTCGCCCT GCCGCCGCAA ACCTTCGACC GGATTGAGAT CGAGGCGCTG
GTGCTCGGCC TCGCCGAGGT TCGCCATATG GGCGATCCGG CCCTGGAGCA GGCCGCCGCC
TCGGTGCTGG CCAAGGTCGC TGCCACCCTT CCCGACCGGG CCGAGCAGCA TCTGCTCCAC
GCGGTTTCGC AGGTTCGCCG CGCCGAGCCG CGCTTTCCTG CGATCCCCGA CATGGAGACG
ATCCGGACCG CCTGCTGGCG CGAGGAGGCG CTGCGGCTGC GCTATGCCGA CAACGACGGT
GCTGTCACCG AGCGGACGAT CCTGCCGCTC TCCGTGGTCT ATCTCGACAG CAAGATGACG
CTGCTGGCGT GGTGCTGCCT GCGCGAGGCG TTCCGCATGT TCCGGCTGAA TCGCATCCGC
GAGGCGGGCC CGGCGGGGAC CAGTTTCCGC CCGCGGCGGG CAGCACTGCT GCGCGGTTAC
CTTGCCGAAT TGCGTGCCGG CGGGGGTTTC GCGGCCCGAG GCGAACCTGC GCACAACGAG
CCGACGTGA
|
|---|
| Protein sequence | MARTDRLFRL LHAMRILPSP VTAARLAEET GVSLRSLYRD IDSLRAAGAR IEGERGYGYR
LIEDVALPPQ TFDRIEIEAL VLGLAEVRHM GDPALEQAAA SVLAKVAATL PDRAEQHLLH
AVSQVRRAEP RFPAIPDMET IRTACWREEA LRLRYADNDG AVTERTILPL SVVYLDSKMT
LLAWCCLREA FRMFRLNRIR EAGPAGTSFR PRRAALLRGY LAELRAGGGF AARGEPAHNE
PT
|
|---|
| |