| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2543 |
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| Symbol | |
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| ID | 6310118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 2766232 |
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| End bp | 2768076 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 642651267 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001925235 |
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| Protein GI | 188581790 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.23418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.267124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCAA CCGCGCTCGC GAACAACGCC GCGGCGGCTA AGGATGACGA ACCGTCTTTC
ACGACGGCCG AGGTGCGTCC CGGCATCGGG GGCGCGCTCC TCGGCGTCGG CTTGCTGAGC
GCCCTGGTGA ACCTGCTCTA TCTCACCGGC TCGCTGTTCA TGCTGGAGGT GTACGACCGG
GTGCTGCCGA GCCGCAGCGT GCCCACGCTG CTCGGGCTCG CCGCCATCGT TCTCGTCCTC
TACGGCTTCC AGGGCCTGTT CGACGTGTTG CGCAACCGCC TCCTCGTCCG GATCGGCGCG
TCCGTGGACC GGGCGTTCGG GCGCCGCACC TACGACGCCG TGGTGCAGGC CCCGCTCGTC
GCCTCGCGTC ACGGCGACGG ACTGCAGCCG CTGCGCGACC TCGACCAGGT TCGCACCTTC
CTGTCGAGCC CGGGGCCGGC CGCCCTGTTC GACCTGCCCT GGATCCCCCT CTACCTGCTG
CTCTGCTTCG CCTTCCACCC CTGGATCGGC GCGGCGGTGC TGGGGGGTGC GCTGCTTCTC
GTCTCCATCA CCCTCGTCAC GGACCTCCTG ACCCGCCGTC CGTCGCGGGC AGCGGCCGCA
GCGGCCGGAC AGCGCTACAC CCTGGCAGAG GCCGGCCGGC GCAATGCCGA GGTTCTGCGG
GCAATGGGTA TGGCCCCGCG CACGGGCGAC ATCTGGGCCG AGGCGAGCGA GCGCAACCTC
GTGGCCCAGC GGCGCATATC GGACGTCGCC GGCGGGTTCG GGGCCCTGGC CAAGGTGCTG
CGCCTTACCC TGCAATCCCT GGTGCTCGGC GTCGGCGCCT ACCTCGTGAT CGCGGGCGAG
GCGACGGGCG GCATCATGAT CGCGAGCTCG ATCCTGGTCG CCCGGGCCCT GGCCCCGGTG
GAGCTGGCGG TGGCGCACTG GAAATCGCTC GTGGCGGCCC GACAGGGCTG GGGGCGCCTC
AAGGCCTTCC TCGCCTCGTT CCCGAGCGAG CGGTTGAGCG TCGCCCTGCC GCCCCCCTGC
GAGAGCGTCC GGGTCGAGGC CGTGACGGTC ACGGCCCCCG GGCTCGAACA TGCCCTCGTC
GAAGACGCCA CCTTCTCGCT GCGGGCCGGC GAGGGGCTCG GCGTCATCGG TGCCAGCGGC
TCCGGCAAGT CCTCGCTCAT CCGTGCCCTG GTCGGGATCT GGGCGCCGCT CCGCGGCTGC
GTCCGGCTCG ACGGCGCCAC CCTCGACCAG TGGCCGCCGG AGGTGCTGGG CCGGCACATC
GGCTACCTGC CGCAGGACGT CGAACTCTTC GCCGGCACGG TGGCGCAGAA CATCGCGCGC
TTCGACCCGG TCGCGCCCTC CGAGGCCATC GTCGCCGCCG CACGCGCCGC CGGCGTCCAC
GACCTCGTGT GCTCCTTGCC GAGGGGCTAC GACACGCCCA TCGGCGAAGG CGGGGCCGCC
CTGTCGGGAG GGCAGCGCCA GCGCATCGCG CTGGCGCGCG CCCTCTACGG CGAGCCGTTC
GTCGTCGTCC TCGACGAGCC GAACTCCAAC CTCGACGCGG AGGGCGAGGA CGCCCTGAAC
CGCGCGATTC GGGACGTGCG CGCCCGCGGC GGCACCGTGA TCATCGTAGC CCACCGCCCG
AGCGCCCTCG CGGCGGTCAA TCGCGTGCTG TTCATGGCGG ACGGCCGGGT CCGCGCCTTC
GGGCCCAAGG ATGAGGTCCT GTCCGCCCTG AAGCGCCCGG CCGCGGCCGC GAGCGCCCGG
CTGCCTCGGG TCGAGGGCAA GGAGCGCCCG CCATCCGAGA GACCGGTGCC GCTGCGCGTG
GTCGCCGACG CCGAAGGGGC CCTGTCAGAA GGAGCGCGGG CATGA
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| Protein sequence | MQPTALANNA AAAKDDEPSF TTAEVRPGIG GALLGVGLLS ALVNLLYLTG SLFMLEVYDR
VLPSRSVPTL LGLAAIVLVL YGFQGLFDVL RNRLLVRIGA SVDRAFGRRT YDAVVQAPLV
ASRHGDGLQP LRDLDQVRTF LSSPGPAALF DLPWIPLYLL LCFAFHPWIG AAVLGGALLL
VSITLVTDLL TRRPSRAAAA AAGQRYTLAE AGRRNAEVLR AMGMAPRTGD IWAEASERNL
VAQRRISDVA GGFGALAKVL RLTLQSLVLG VGAYLVIAGE ATGGIMIASS ILVARALAPV
ELAVAHWKSL VAARQGWGRL KAFLASFPSE RLSVALPPPC ESVRVEAVTV TAPGLEHALV
EDATFSLRAG EGLGVIGASG SGKSSLIRAL VGIWAPLRGC VRLDGATLDQ WPPEVLGRHI
GYLPQDVELF AGTVAQNIAR FDPVAPSEAI VAAARAAGVH DLVCSLPRGY DTPIGEGGAA
LSGGQRQRIA LARALYGEPF VVVLDEPNSN LDAEGEDALN RAIRDVRARG GTVIIVAHRP
SALAAVNRVL FMADGRVRAF GPKDEVLSAL KRPAAAASAR LPRVEGKERP PSERPVPLRV
VADAEGALSE GARA
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