| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2481 |
|---|
| Symbol | |
|---|
| ID | 6313048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 2699005 |
|---|
| End bp | 2699751 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642651209 |
|---|
| Product | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| Protein accession | YP_001925177 |
|---|
| Protein GI | 188581732 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0182367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCTGT ATCCGGCCAT CGACCTCAAG GAAGGGCGCT GCGTCCGCCT CGTTCAGGGC
GACATGGCCC AGGCCAAGGT CTTCAACGAC GACCCCGCGG CGCAGGCCGC GGCCTTCGAA
TCCCAGGGCT TCTCCTGGCT GCACGTGGTG GATCTCGACG GCGCCTTCGC CGGGGCACCG
CGCAACGCCG CGGCGGTGGA TGCGATCCTG GCGCGGGTGA GCATGCCGGT GCAGCTCGGC
GGCGGCGTGC GCGAGATGCG CACCCTCGAA GGCTGGCTGG AGAAGGGCGT GAGCCGCGTC
ATCATCGGCA CCGCGGCAGT GCGCGATCCG GCCTTCGTCC GCGAGGCCGC CCGGCGCCAT
CCGGGAAAGA TCGCCGTCGG CATCGACGCC AAGGACGGGC GCGTCGCGGT CGAGGGCTGG
GCCCAGACCT CCAGCATGAC GGCGGAGGAA CTCGGGCGCC GCTTCGAGGA TGCCGGTGTC
GCCGCGATCA TCTACACCGA CATCGCCCGC GACGGCATCC TCAAGGGCCT CAATATCGAG
ATGACGCTGG CGCTCGCCGC CGCCGTGAAC ATCCCGGTCA TCGCCTCGGG GGGCCTCGCC
TCGATCGCCG ACGTCGAGCG CCTGCTGGAG CCGGACTGCG CCGTGCTGGC CGGTGCCATC
ACCGGACGCG CCCTCTACGA CGGCCGCATC GACCCGAAGG AGGCACTCGC CGCCATCGCC
CGCTCCCGGA GCGGTGCCGC TTCGTGA
|
|---|
| Protein sequence | MILYPAIDLK EGRCVRLVQG DMAQAKVFND DPAAQAAAFE SQGFSWLHVV DLDGAFAGAP
RNAAAVDAIL ARVSMPVQLG GGVREMRTLE GWLEKGVSRV IIGTAAVRDP AFVREAARRH
PGKIAVGIDA KDGRVAVEGW AQTSSMTAEE LGRRFEDAGV AAIIYTDIAR DGILKGLNIE
MTLALAAAVN IPVIASGGLA SIADVERLLE PDCAVLAGAI TGRALYDGRI DPKEALAAIA
RSRSGAAS
|
|---|
| |