Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_2429 |
Symbol | |
ID | 6313145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 2639267 |
End bp | 2640802 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642651158 |
Product | RNA polymerase, sigma 54 subunit, RpoN |
Protein accession | YP_001925126 |
Protein GI | 188581681 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0481489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTGC TGCAACGGCT CGAAATGCGC CAGGGTCAGT CCCTGGTGAT GACGCCGCAG CTGCTGCAGG CGATCAAGCT TCTCCAACTC TCGCAGCTCG ATCTGGCAGC CTATGTCGAT GCCGAGCTGG AGCGCAATCC GCTGCTGGAG CGCACCGAGG GCGAGCCGGC CCCCGAGCGC GATGTGCCGG AGGCGTCGGG CGACGGCGAC TACGAGGGCG GCGACGGGCC GGAGCCCGAG GCATGGCTCG CCTCCGACAT GACGCCGAGC CGCAGCGAGA TCGAGGGCGA CCTCGACACG CGCCTCGACA ACGTCTTTGC CGACGAGAAC CCCGCCCCGC GCGAGACCGC TTCCGGCGAC ATGCTCTCGC TGACGCCCGC TCCCTACGGC AATACCGGCG GCAGCTTCGA CGGGGAGCTT CCCGATTTCG AAGCGTCGCT GACCGCCGAG ACGAGCCTGC GCGAGCACCT TGCCGCCCAG CTCGACCTCG CGACCCAGAA CCCGTCCGAC CGATTGATCG GCAGCTTCCT CATCGACGCG GTGGACGATG CCGGCTACCT GCGCGAGGAC ATCGACGGTG TGGCCGAACG GTTCGGCGCC TCGCTCGACG ACGTCGCCCG CATCCTGAAG CTCGTCCAGA CCTTCGACCC GCCGGGCGTG GCTGCCCGCG ACCTCGCCGA ATGCCTCGCG ATCCAGCTCC GCGAGCAGGA CCGGTTCGAC CCGGCGATGC AGGCTCTGGT CTCGCGCCTC GACCTCGTGG CGAAGCGCGA CTTTCCCGCC CTGCGCCGCC TGTGCGGCGT GGACGACGAG GATCTCGTCG AGATGCTGGC CGAGATCCGC CGGCTCGATC CGAAGCCCGG CCGCGCCTTC GGCGCGCACG CCGTCGAGGT GCTGGTCCCC GACGTGTTCG TCCGCCCGGC ACCGGACGGC TCCTGGCTGA TCGAGCTGAA TTCCGAGACG CTGCCGCGGG TGCTGGTCAA CCAGAGCTAC TATGCCCGCG TCTCCAAGGG GGCGGTGGCG GACGGCGACA AGGCCTTCCT GTCCGAATGC CTGCAGACCG CCAACTGGCT CACCCGCAGT CTGGAGCAGC GGGCACGCAC GATCCTGAAG GTCGCCACCG AGATCGTGCG CCAGCAGGAT GCCTTCTTCC TGCACGGCGT CGCCCATCTG CGCCCGCTGA ACCTCAAGAC CGTCGCCGAG GCGATCGGCA TGCACGAATC GACCGTCTCT CGGGTGACCT CCAACAAGTC GATCGGCACC AGCCGCGGCA CCCTGGAGAT GAAGTACTTC TTCACCGCCG CGATCCCCGG CGCCGCCGGT GCGGCGGCCC ATTCCTCGGA GGCCGTGCGC CACCGCATCA AGCAGCTCGT GGACGCGGAA GCCGCCGACG TTCTGTCCGA CGACGCGCTG GTGCAGCGGC TGCGCGACGA GGGCGTCGAC ATCGCGCGGC GCACCGTCGC CAAGTACCGG GAGTCGCTGC GTATCCCCTC TTCGATCGAT CGCCGCCGGG CGAAGATGGC CGGCGCTCCC CGCTGA
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Protein sequence | MSLLQRLEMR QGQSLVMTPQ LLQAIKLLQL SQLDLAAYVD AELERNPLLE RTEGEPAPER DVPEASGDGD YEGGDGPEPE AWLASDMTPS RSEIEGDLDT RLDNVFADEN PAPRETASGD MLSLTPAPYG NTGGSFDGEL PDFEASLTAE TSLREHLAAQ LDLATQNPSD RLIGSFLIDA VDDAGYLRED IDGVAERFGA SLDDVARILK LVQTFDPPGV AARDLAECLA IQLREQDRFD PAMQALVSRL DLVAKRDFPA LRRLCGVDDE DLVEMLAEIR RLDPKPGRAF GAHAVEVLVP DVFVRPAPDG SWLIELNSET LPRVLVNQSY YARVSKGAVA DGDKAFLSEC LQTANWLTRS LEQRARTILK VATEIVRQQD AFFLHGVAHL RPLNLKTVAE AIGMHESTVS RVTSNKSIGT SRGTLEMKYF FTAAIPGAAG AAAHSSEAVR HRIKQLVDAE AADVLSDDAL VQRLRDEGVD IARRTVAKYR ESLRIPSSID RRRAKMAGAP R
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