Gene Mpop_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2427 
Symbol 
ID6309187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2637281 
End bp2638033 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content70% 
IMG OID642651156 
ProductOstA family protein 
Protein accessionYP_001925124 
Protein GI188581679 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0150816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGC GTCTCGGCCC GGCCCTGGCC GCCGGTCTCG CCCTGCTCCT GGTCCTGCCG 
GCCGCTGCGG CTCCTCCCAA GGAGCCCACC AAGGATTCTG CCAAGGACAC GGCGAAGGAG
AAGTCCGCGC CGCTCGGCAC CGTGGGCGGC GGCAAGGGGC CGATCAAGAT CGACGCCGAC
CGTCTCGACG TGTTCGACAA GGAGAACAAG GCGATCTTCG CCGGCAACGT CGTGGCGGTG
CAGGGCGAGA GCACGATCCG CTGCTCGGCC ATGACGGTCC ATTATAAGCG CGACAAGGAC
AAGGATCCGG GCAAGGACGC CGCGAAGGGT GATCCGAAGA CCGACGCTCA GGCGGCCGAG
GACGCGAAGG CCAAGGCGGC GATGGGCGGC AGCGGCATCC GCAAGGTCGA GTGCGCCGGC
CCCGTCACCG TGGCGCAGAA GGATCAGATC GCCACCGGCG ACAATGCGGT GTTCGATCAG
GAAGCCAAGC GCATCGTGCT GACGGGCAAC GTCGTGCTCA GCCAGTGCCA GAACGTCACC
CGCGGCTCGC GGCTCGTCTA CGACATGGCG ACCGGCCGCG CGAACATGGA CCCGGTGGCG
GGCGGGCGCG TCTCGGCGAT GTTCGTGCCG GGCGAGGGCG CCGAGGCCAA GGGGGGGCAG
CCGAAGGGCT GCACCCAGCC GGCCGTCGCG GCCAAACCCG GCGGCAAGGC TGCCGAGAAG
CCGGCCGCGA AGACGCGGGC GCAGGCGAAC TGA
 
Protein sequence
MTRRLGPALA AGLALLLVLP AAAAPPKEPT KDSAKDTAKE KSAPLGTVGG GKGPIKIDAD 
RLDVFDKENK AIFAGNVVAV QGESTIRCSA MTVHYKRDKD KDPGKDAAKG DPKTDAQAAE
DAKAKAAMGG SGIRKVECAG PVTVAQKDQI ATGDNAVFDQ EAKRIVLTGN VVLSQCQNVT
RGSRLVYDMA TGRANMDPVA GGRVSAMFVP GEGAEAKGGQ PKGCTQPAVA AKPGGKAAEK
PAAKTRAQAN