Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_2419 |
Symbol | |
ID | 6309179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 2629609 |
End bp | 2630925 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642651148 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001925116 |
Protein GI | 188581671 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTATCG ACGCCCAGCC CTCCTCCACT CCGGTATCGC GGACGCCGTC CCGGCGCGCC CTGCGCGGGC TCGACCTGCT CAACCTCACC CTCGCCGATG TCCGCGACGG CCTCGGCCCC TATCTCGCCA TCTACCTGCT GGCCGTGCGT GGCCCCGACC AGAGCTGGAA CGAGGCGACC ATCGGCCTCG TGATGACGAT CGCCGGCATT GCCGGCCTGC TCGCCCAGAC ACCAGCCGGC GCCCTGATCG ACCGCACCAA CGCCAAGCGC AGCGTCGTCA TCGCCGCGGC GGTCGTCGTC ACGGTGAGCT GCCTCGTCCT GCCGTGGATC TCGAATTTCT ACCTCGTCGC CGGCACGCAG GCGCTGGCGA GCATGGCCGG CTCGGTCTTC GCGCCGGCGC TGACCGGCAT CACCCTCGGC ATTGTCGGCC CGCGGCTGTT CTCGAAGCGC ATCGGCCGCA ACGAGGGCTT CAACCATGCC GGCAATGCGG TCTCGGCGAT GCTGGCAGGC GGGCTCGCCT ATCTCTTCGG CCCCATCGTC GTGTTCTGGC TGATGGGCAT CCTCGCCGCC TGCTCCATCG TCGCGATGCT GATGGTGCCG GCCGACGCCA TCGACGACGA CCTCGCCCGC GGCCTCGACT GCGCCGCCGA CCAGACCTGC GAGCAGCCCT CGGGCCTGAG CCTGCTCCTG CGCAACCGCC ACCTGCTGCT GTTCGCGATG CTCTGCGCCG CCTTCCACCT CGCCAACGCG GCGATGCTGC CTTCCGTCGG GCAATTGCTC ACCAAGGTCG TGGGCAAGGA CAACGCAACG TCGCTGATCG CCGTCTGCAT CGTCGCCGCC CAATGCGTGA TGGTGCCGAT GGCGATCCTG GTCGGCGCCA AGGCCGACAG CTTCGGCCGC AAGCCGATCT TCCTCGTGGC CTTCGGGGTG CTGGCCCTGC GCGGCGTGCT CTACACCTTC TCCGACAACC CGTTCTACCT CGTGGCGGTG CAATGCCTGG ACGGCGTCGG CGCCGGCATC TACGGCGCGC TGTTCCCGAT CGTCGTGGCC GACCTCACCC GCGGCACCGG CCGGTTCAAC GTCGCCCAGG GCGCGGTGGC GACGGCGCAG GGTCTCGGCG CGGCCCTGAG CGCGACGCTG GCGGGCGTGG TCATCGTCGG AGCGGGCTAC TCGGCGGCCT TCCTCGTGCT CGCGGCGATC GCGGCGGCGG GCTTCGCGCT CTACCTGCTG TTCATGCCCG AGACCTTCGC CTACGAGCCG CGCTCGACGG ATGTGCCGCC CAGAACGCCC TCGACGCTGG TCGCGCCGGC CGAGTAG
|
Protein sequence | MPIDAQPSST PVSRTPSRRA LRGLDLLNLT LADVRDGLGP YLAIYLLAVR GPDQSWNEAT IGLVMTIAGI AGLLAQTPAG ALIDRTNAKR SVVIAAAVVV TVSCLVLPWI SNFYLVAGTQ ALASMAGSVF APALTGITLG IVGPRLFSKR IGRNEGFNHA GNAVSAMLAG GLAYLFGPIV VFWLMGILAA CSIVAMLMVP ADAIDDDLAR GLDCAADQTC EQPSGLSLLL RNRHLLLFAM LCAAFHLANA AMLPSVGQLL TKVVGKDNAT SLIAVCIVAA QCVMVPMAIL VGAKADSFGR KPIFLVAFGV LALRGVLYTF SDNPFYLVAV QCLDGVGAGI YGALFPIVVA DLTRGTGRFN VAQGAVATAQ GLGAALSATL AGVVIVGAGY SAAFLVLAAI AAAGFALYLL FMPETFAYEP RSTDVPPRTP STLVAPAE
|
| |