Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_2411 |
Symbol | |
ID | 6313884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 2621941 |
End bp | 2623398 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642651140 |
Product | type II secretion system protein E |
Protein accession | YP_001925108 |
Protein GI | 188581663 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGTC GACGCTCCAA CGCCGCATCG GCTCCTGCGC CCGCTGCTTC CGCAGCCGGG GCGGCCAAGG TCGTCCCGCC GGTCCTCCAG CAGGAGGCCG TGCGTGCGCG CCCCGAACCA TCGCCGGTTC CGGCGCCGCA GGCACCGCAG GCGCCGCTGC CGAAGTCCGA GGACTACTTC CGCACGAAGA GCATGATCTT CGGCGCGCTG ATCGAGGCCA TCGATCTCGC TCAGCTCGCC CGGCTCGAAG GCGAGGCGGC GCGGGAGGAA ATCCGCGACA TCGTCTCGGA GATCATCGGC CTCAAGAACA TCGTGCTGTC GATCGCCGAG CAGGAGGAAC TGCTCGACGA CATCTGCAAC GATGTGCTCG GCTACGGTCC GCTGGAGCCG CTGCTCGCCC GCGACGACAT CGCCGACGTG ATGGTGAACG GCGCCGACCG GACCTTCATC GAGGTCGCCG GCAAGATCCA GCTCACCTCG GTACGCTTCC GCGACAACCA GCAACTGATG AACATCTGCC AGCGGATCGT CAGCCAGGTG GGGCGCCGTG TGGACGAGGC CTCTCCGATC TGCGACGCGC GCCTGCCCGA CGGCTCCCGC GTCAACGTCA TCGCCCCGCC GCTCGCCATC GACGGGCCGG CGCTGACCAT CCGCAAGTTC AAGAAGGACA AGCTCACCCT CGACCAGCTC GTGCGCTTCG GGGCGATCTC GCCGGAGGGC GCGAAGATCC TGCAGATCAT CGGCAAGGTC CGCTGCAACG TGGTGATCTC GGGCGGCACC GGCTCGGGCA AGACGACCCT GCTCAACTGC CTCACCGCCT TCATCGAGCA CGACGAGCGC GTCATCACCT GCGAGGACGC CGCCGAGCTC CAGCTTCAGC AGCCGCACGT GGTGCGCCTC GAGACCCGGC CCCCGAACCT GGAGGGGCAG GGGCAGGTCA CCATGCGCGA CCTCGTCAAG AACTGCCTGC GCATGCGGCC CGAGCGCATC ATCGTCGGCG AGGTGCGCGG ACCGGAAGCC TTCGACCTGC TGCAGGCGAT GAACACCGGC CACGACGGTT CGATGGGGAC GCTGCACGCC AACTCCCCGC GCGAATGCCT CGCGCGTATC GAGTCGATGA TCACCATGGG CGGCTTCTCG CTGCCCTCGC GGACCTTGCG CGAGATGATC ACCGGCTCGG TCGACGTGAT CATCCAGGCG ATGCGCATGC GCGACGGTTC GCGGCGCATC ACCCACATCA CCGAGGTGAT GGGGATGGAG GGCGACGTCA TCATCACCCA GGACCTGTTC GTCTACGATG TGCTCGGCGA GGACGCCAAT GGGCGCCTGA TCGGCCGTCA CCGCTCCACC GGGATCGGCC GCCCGCGCTT CTGGGAGCGG GCCCGCTATT ACGGTGAGGA GCGGGCGCTG GCGGCCGCCC TCGACGCCGC CGCCGACAAG ACGGAGGAGG CCCTGTGA
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Protein sequence | MFGRRSNAAS APAPAASAAG AAKVVPPVLQ QEAVRARPEP SPVPAPQAPQ APLPKSEDYF RTKSMIFGAL IEAIDLAQLA RLEGEAAREE IRDIVSEIIG LKNIVLSIAE QEELLDDICN DVLGYGPLEP LLARDDIADV MVNGADRTFI EVAGKIQLTS VRFRDNQQLM NICQRIVSQV GRRVDEASPI CDARLPDGSR VNVIAPPLAI DGPALTIRKF KKDKLTLDQL VRFGAISPEG AKILQIIGKV RCNVVISGGT GSGKTTLLNC LTAFIEHDER VITCEDAAEL QLQQPHVVRL ETRPPNLEGQ GQVTMRDLVK NCLRMRPERI IVGEVRGPEA FDLLQAMNTG HDGSMGTLHA NSPRECLARI ESMITMGGFS LPSRTLREMI TGSVDVIIQA MRMRDGSRRI THITEVMGME GDVIITQDLF VYDVLGEDAN GRLIGRHRST GIGRPRFWER ARYYGEERAL AAALDAAADK TEEAL
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