| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2353 |
|---|
| Symbol | |
|---|
| ID | 6310553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 2513667 |
|---|
| End bp | 2514557 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642651079 |
|---|
| Product | dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | YP_001925050 |
|---|
| Protein GI | 188581605 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.404178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCC TGATCCTCGG CGGCGCCGGG CAGGTCGGCA CGGAGCTTCA GGCCTTCCCC
TGGCCCGAAG GCGTGCGGGT GCACGCCCCC GACCGCCAGA GCCTCGACAT CACCGACGAG
GCCGCTGTCG CCGCAGCCCT CGACGCGCGC GCCTACGCGG CGGTGATCAA CACCGCCGCC
TACACCGCGG TGGATCGGGC CGAGAGCGAG GTTGCCGCCG CGTGGCGGCT CAACGCGCTG
GCCCCCGCCA TCCTCGCCGC CGAGACGAGG CGGCGCGCCA TCCCCCTCAT CCATGTCTCG
ACCGATTACG TCTTCGACGG CTCGGGTGAG GGCTTCTACG CCCCCGATGC GCCGGTGAAC
CCGAAGAGCG TCTACGGCGC CAGCAAGGCG GCGGGCGAGA TGGCGGTGCG CAGCGCCAAC
CCGCGCCACG TCATCGTCCG CACCGCCTGG GTGGTGAGCC CGCACCGGGG CAACTTCGTC
AAGACGATGC TGCGGCTGGC AAACGAGCGG GACAGGCTCA CCGTGGTGGA CGACCAGCAC
GGCTGCCCGA CCTCGGCCGC CGACCTCGCG GGCGCGCTTG CCGCCATCGC CCTGCGTCTT
GCGGGTGACG AGGCGGCGCC GACCGGCACC GTCCACTGCG TCAACGACGG CGCGACCACG
TGGTGCGACT TCGCCCGCGC CATCGTCGCG GGCGCGGCCC GGCGCGGCGG ACGCAGCGTT
CCGGTCGCGG GCATCCCGAC CGCCGCCTAC CCGACCCCGG CCCGGCGCCC GGCCAATTCC
CGCCTCTCGA CCCAGAGCCT GACCGACGCC TTCGGCATCG CACCGCGGGG CTGGGAGGCG
GCGCTCGACG ACATCCTCGA CCGGCTGGTC GGGCCGGTCC GCTCCCACTG A
|
|---|
| Protein sequence | MDILILGGAG QVGTELQAFP WPEGVRVHAP DRQSLDITDE AAVAAALDAR AYAAVINTAA
YTAVDRAESE VAAAWRLNAL APAILAAETR RRAIPLIHVS TDYVFDGSGE GFYAPDAPVN
PKSVYGASKA AGEMAVRSAN PRHVIVRTAW VVSPHRGNFV KTMLRLANER DRLTVVDDQH
GCPTSAADLA GALAAIALRL AGDEAAPTGT VHCVNDGATT WCDFARAIVA GAARRGGRSV
PVAGIPTAAY PTPARRPANS RLSTQSLTDA FGIAPRGWEA ALDDILDRLV GPVRSH
|
|---|
| |